Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda08g00448 ATGTGCGTCTTTCTGGAGAAATGGCGAGTCTTGTGGCTTCTTTGCGTTTATCTGATGTCTTTCTTCATATGCAAGAGCAGTGGTATCAGTCCTGATGGTGAGGCACTTTTAAGTTTTAGGACAGCTGTAGTTAATTCTGATGGTACTCTCCTTCACTGGAGACAAGAGGATACTGACCCATGCGATTGGAAAGGAGTGAAGTGCGATCCAAAAACGAAGAGAGTCGTATTCTTGAATCTTGCAAATCACAAACTGAGTGGATCGATATCATCTGGCCTTGGGAAGCTAGATCAAATGAAAATTTTAGTTCTTCACGACAATAACTTCTATGGGTCAATTCCAGCCGAATTGGGAAATTGCTCGCAGTTGAAAGGACTATTCTTGCAGCGTAATTACTTAAGTGGATCAATACCAAGTGAATTAGGAAATCTTTCAGAACTGGAGAATCTAGACATTTCAAGCAATTCTCTGAGCGGAAATATCCCCGCATCGCTTGGGAAATTGGATAGACTAACATCCTTCAATGTTTCAACCAACTTTTTGATCGGACCAATTCCTTCCGATGGCATCTTCCTCAACTTTACCGAGAGCTCCTTTGTTGGAAACCGAGGTTTGTGCGGAAGACAGATTAGTGTGACTTGCAAAAATGAAAGTGGAGTGTCGGGATCGAACTCCCACCCCCAATCTTCAAACTCCGATCAAAATCCAGGTGGAAAAAGGAAATACTCTGGTCGCCTTCTTATAAGTGCGTCAGCTACTGTTGGTGCACTTCTTCTGGTAGCACTTATGTGCTTTTGGGGGTGCTTTTTGTATAAGAAGTTTGGTAAAAATGACAACAAAGGTCTTGCCGTTGATGTTTCTGGAGGGGCATCAATTGTAATGTTTCATGGAGACTTACCGTATTCTTCGAAAGACATAATTAAGAAACTGGAAACATTGAACAAAGAACACATAATAGGCTGTGGTGGTTTCGGAACCGTCTACAAGCTAGCAATGGATGATGGCAATGTATTTGCTCTGAAAAGAATCGTAAAGATGAACGAAGGGTTTGATCGGTTTTTTGAGAGAGAGCTCGAGATTCTTGGAAGCATAAAACATCGTTACCTTGTGAATTTGCGGGGTTATTGCAATTCTCCGACGTCAAAACTGCTCATTTATGATTTTCTCTCGGGTGGTAGTCTCGACGAAGCGCTTCATGAAAGATCTGAACTACTCGACTGGGATGCACGATTGAACATTATCTTGGGAGCAGCGAAAGGGTTAGCCTACTTGCATCATGATTGCTCGCCCAGGATCATTCATCGGGACATAAAATCGAGCAACATTTTACTTGATGGCAATCTGGAGGCTCGAGTTTCTGACTTTGGACTAGCCAAACTTTTGGAGGATGAAGAATCTCATATTACGACCATTGTGGCCGGAACATTTGGTTATCTGGCTCCCGAGTATATGCAGAGTGGTAGGGCTACCGAAAAGACGGATGTTTATAGTTTTGGGGTGCTCGTGCTTGAAGTGTTGAGCGGAAAGCGACCCACCGATGCTTCGTTCATTGAGAAAGGCCTCAACATTGTTGGCTGTTTAAATTTTCTGGTCTCCGAAGATAGGCAAAGAGAAATTGTCGATCCACAATGCGAGGGAGTGCAGACGGAAACTCTAGATGCCTTGCTCTCGGTAGCCATCCAGTGTGTTTCTTCAAGTCCGGAGGAGAGGCCGACCATGCACAGGGTCGTACAATTGCTCGAGTCCGAGGTTATGACCCCGTGCCTAAGCGACTTCTACGATACAAACTCAGACTAA 1797 43.96 MCVFLEKWRVLWLLCVYLMSFFICKSSGISPDGEALLSFRTAVVNSDGTLLHWRQEDTDPCDWKGVKCDPKTKRVVFLNLANHKLSGSISSGLGKLDQMKILVLHDNNFYGSIPAELGNCSQLKGLFLQRNYLSGSIPSELGNLSELENLDISSNSLSGNIPASLGKLDRLTSFNVSTNFLIGPIPSDGIFLNFTESSFVGNRGLCGRQISVTCKNESGVSGSNSHPQSSNSDQNPGGKRKYSGRLLISASATVGALLLVALMCFWGCFLYKKFGKNDNKGLAVDVSGGASIVMFHGDLPYSSKDIIKKLETLNKEHIIGCGGFGTVYKLAMDDGNVFALKRIVKMNEGFDRFFERELEILGSIKHRYLVNLRGYCNSPTSKLLIYDFLSGGSLDEALHERSELLDWDARLNIILGAAKGLAYLHHDCSPRIIHRDIKSSNILLDGNLEARVSDFGLAKLLEDEESHITTIVAGTFGYLAPEYMQSGRATEKTDVYSFGVLVLEVLSGKRPTDASFIEKGLNIVGCLNFLVSEDRQREIVDPQCEGVQTETLDALLSVAIQCVSSSPEERPTMHRVVQLLESEVMTPCLSDFYDTNSD 598
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 4605115 4608509 - Bda024898.1 Bda08g00448 11304
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda08g00448 598 Pfam Protein kinase domain 314 578 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bda08g00448 598 SUPERFAMILY Protein kinase-like (PK-like) 296 580 IPR011009 -
Bda08g00448 598 Gene3D Phosphorylase Kinase; domain 1 288 388 - -
Bda08g00448 598 SUPERFAMILY L domain-like 30 195 - -
Bda08g00448 598 Gene3D Transferase(Phosphotransferase) domain 1 389 588 - -
Bda08g00448 598 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE FEI 1 4 598 IPR031071 GO:0004672|GO:0005524|GO:0030244
Bda08g00448 598 MobiDBLite consensus disorder prediction 217 238 - -
Bda08g00448 598 ProSitePatterns Serine/Threonine protein kinases active-site signature. 432 444 IPR008271 GO:0004672|GO:0006468
Bda08g00448 598 Pfam Leucine rich repeat N-terminal domain 31 69 IPR013210 -
Bda08g00448 598 ProSitePatterns Protein kinases ATP-binding region signature. 319 345 IPR017441 GO:0005524
Bda08g00448 598 SMART serkin_6 313 585 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bda08g00448 598 Gene3D Ribonuclease Inhibitor 30 215 IPR032675 -
Bda08g00448 598 ProSiteProfiles Protein kinase domain profile. 313 585 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bda08g00448 598 PANTHER RECEPTOR-LIKE PROTEIN 55 4 598 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda08g00448 Bda-Chr8:4605115 Bda03g00411 Bda-Chr3:3543626 3.00E-104 dispersed
Bda09g00563 Bda-Chr9:7556454 Bda08g00448 Bda-Chr8:4605115 2.27E-98 transposed
Bda15g00592 Bda-Chr15:9123939 Bda08g00448 Bda-Chr8:4605115 7.35E-47 transposed
Bda14g01141 Bda-Chr14:10578947 Bda08g00448 Bda-Chr8:4605115 2.05E-85 transposed
Bda06g00167 Bda-Chr6:2377946 Bda08g00448 Bda-Chr8:4605115 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
69763 PF00069 Pkinase 7.70E-47 CL0016 Bda PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda08g00448 - - jre:109014233 985.326