Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Bda08g00454 | ATGGCACAATTAGAGGCATCTACAAATCAGGAGCTGATTCAGACGCCTCCTCTTTTTAAACTTCCCTCAAAGATTCTTTGTCGTGTGATGAACATTCAGCTTCTGGCAGAGCAAGAAATGGAGGATGTTTATGCACAAGTAACTCTAATTCCAGACCATAATCAAACTGATCCAGATGTTCCCGATTCTTGTGATGTTGAACCTTCAAAGCCAGCAGTGCACTCATTTTGCAAGGTTTTAACTGCATCAGATACCAGCACCCATGGAGGTTTCTCTGTACTTCGTAAACATGCTACTGAATGCCTTCCTCAGTTGGACATGACCCAGCCAACCCCGACACAGGAACTTGTCGCCAAGGACCTTCATGGTTATGAATGGAGATTCAAGCATATTTTTAGAGGTCAACCACGGAGGCACTTGCTGACGACTGGATGGAGTACGTTTGTAACCTGCAAGAGATTAGCTGCAGGGGATTCTTTTGTATTTTTGAGAGGGGACAGCGGGGAATTACGCGTTGGAGTAAGGCGCCTTCCTCGTCAGCAAAGCAACATACCTACAACTGTTATCTCTAGTCAGAGCATGCACCTTGGAGTGCTTGCCACTGCATCCCATGCTTTAGCGACCAAAAGCCCTTTTGTTGTGTATTATAAACCAAGGTCGAGTCAATTCATTGTGAGCTTGAACAAGTACTTGGAAGCTGTAAACAACAAGTTTGATGTTGGTATGAGATTTAAGATGAGGTTTGAGGGCGAGGATTCTCCTGAGAGAAGGTTTTCAGGTACCGTAGTCAAAGTTGAAGATATGTCTCCTCATTGGGCAGATTCGACTTGGCGATCACTGAAAGTTCAATGGGATGAACCTGCATCTATTCCAAGACCTGAGAGGGTTTCTCCTTGGGAGATAGAACCTTTTGTAGCTTCGGCAGCTGCCAATGTCCCTCTACCAGTTGTAGTAAAGAACAAAAGGCCCCGACCACCAACTGAAATCCCAGCTCTTGATTCTACTACTTCAACTGTATCCTCTCTTTGGCATTCTGGGTTGAGTCAATCTCATGATAGCACGCAATTGAGTGTTGCTGCCAAAAGCAAAAGAAGTGAAAATCTGTGCTGGCATCATAAACATTCCGATATTAGCAGCAATAGCAGCAACTCTGGGTCAATGACACAGAATGATGGTCCTTGGTTAGCTTCCTCACATGCAAATGGTTTGCAGAATCTAAGTCAGGAGGTCACAGAGGATCGCAAAATTCACTCACCTTGGCCTGATTACTCAGGCTATACTACTTCGCATTCATCAAAGCCAGACAATGACTTCAGGCTTGAGAATATGAGGAAGGGGAAGCAAGCTGATATCGGTACTAGCTGCCGCTTGTTCGGTATTGAGCTGATCAATAATTCTGCTTGTACACCTCGCTCAGAGAAGCCATCTAGCGAAACTGCTGAAGGGAATGCTGGTAGAATTTCATTGGCCGATTCTGACAAAAAATCTGAGTTTTCCAAGGCCTTGAAAGAAAAAAATCAAGAGTTGCTGCAGATATCCGCAAAAGAGATGTCAAGCAAGCAAAGCTGCTGCACCAACACTAGAAGCCGCACCAAAGTTCAAATGCTAGGAATGGCTGTTGGTCGTGCGGTGGACTTAACTATGTTGGAAGGGTATGATCAGCTGACAGATGAGCTTGAGAAAATGTTTGAAATTAAGGGGCAGCTTCGCCCACGGGACAAGTGGGAGATTGTTTTTACCGACGATGAAGGAGACATGATGCTCTTGGGAGATGACCCATGGCAGGAATTCTGTAGCATGGTGAGAAGAATATTGATATGTTCAAGCGAGGACGTGAAGAAAATGAGCTGCGGAAAGAAATTTTCCATTTCCTCATCAGAAGGCGAAGGGAATGTAACGAGCTCAGAGTTGGCTGAAATCTGA | 1923 | 44.93 | MAQLEASTNQELIQTPPLFKLPSKILCRVMNIQLLAEQEMEDVYAQVTLIPDHNQTDPDVPDSCDVEPSKPAVHSFCKVLTASDTSTHGGFSVLRKHATECLPQLDMTQPTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTCKRLAAGDSFVFLRGDSGELRVGVRRLPRQQSNIPTTVISSQSMHLGVLATASHALATKSPFVVYYKPRSSQFIVSLNKYLEAVNNKFDVGMRFKMRFEGEDSPERRFSGTVVKVEDMSPHWADSTWRSLKVQWDEPASIPRPERVSPWEIEPFVASAAANVPLPVVVKNKRPRPPTEIPALDSTTSTVSSLWHSGLSQSHDSTQLSVAAKSKRSENLCWHHKHSDISSNSSNSGSMTQNDGPWLASSHANGLQNLSQEVTEDRKIHSPWPDYSGYTTSHSSKPDNDFRLENMRKGKQADIGTSCRLFGIELINNSACTPRSEKPSSETAEGNAGRISLADSDKKSEFSKALKEKNQELLQISAKEMSSKQSCCTNTRSRTKVQMLGMAVGRAVDLTMLEGYDQLTDELEKMFEIKGQLRPRDKWEIVFTDDEGDMMLLGDDPWQEFCSMVRRILICSSEDVKKMSCGKKFSISSSEGEGNVTSSELAEI | 640 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
8 | 4700324 | 4703724 | + | Bda024905.1 | Bda08g00454 | 11310 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Bda08g00454 | 640 | Gene3D | - | 523 | 616 | - | - | |
Bda08g00454 | 640 | MobiDBLite | consensus disorder prediction | 375 | 409 | - | - | |
Bda08g00454 | 640 | CDD | B3_DNA | 74 | 176 | IPR003340 | GO:0003677 | |
Bda08g00454 | 640 | PANTHER | AUXIN RESPONSE FACTOR 9 | 1 | 627 | - | - | |
Bda08g00454 | 640 | MobiDBLite | consensus disorder prediction | 468 | 483 | - | - | |
Bda08g00454 | 640 | Pfam | AUX/IAA family | 508 | 612 | IPR033389 | - | |
Bda08g00454 | 640 | Gene3D | - | 73 | 177 | IPR015300 | - | |
Bda08g00454 | 640 | SUPERFAMILY | CAD & PB1 domains | 521 | 604 | - | - | |
Bda08g00454 | 640 | ProSiteProfiles | B3 DNA-binding domain profile. | 76 | 178 | IPR003340 | GO:0003677 | |
Bda08g00454 | 640 | SMART | B3_2 | 76 | 178 | IPR003340 | GO:0003677 | |
Bda08g00454 | 640 | MobiDBLite | consensus disorder prediction | 375 | 437 | - | - | |
Bda08g00454 | 640 | Gene3D | - | 237 | 310 | - | - | |
Bda08g00454 | 640 | PANTHER | AUXIN RESPONSE FACTOR 4-RELATED | 1 | 627 | IPR044835 | GO:0003677|GO:0006355|GO:0009725 | |
Bda08g00454 | 640 | SUPERFAMILY | DNA-binding pseudobarrel domain | 65 | 205 | IPR015300 | - | |
Bda08g00454 | 640 | Pfam | Auxin response factor | 202 | 281 | IPR010525 | GO:0003677|GO:0005634|GO:0006355|GO:0009725 | |
Bda08g00454 | 640 | Pfam | B3 DNA binding domain | 76 | 176 | IPR003340 | GO:0003677 | |
Bda08g00454 | 640 | ProSiteProfiles | PB1 domain profile. | 528 | 620 | IPR000270 | GO:0005515 | |
Bda08g00454 | 640 | MobiDBLite | consensus disorder prediction | 468 | 492 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Bda08g00098 | Bda-Chr8:866056 | Bda08g00454 | Bda-Chr8:4700324 | 2.36E-38 | dispersed | |
Bda08g00454 | Bda-Chr8:4700324 | Bda10g01146 | Bda-Chr10:45519615 | 0 | dispersed | |
Bda09g01003 | Bda-Chr9:39937064 | Bda08g00454 | Bda-Chr8:4700324 | 1.12E-18 | transposed | |
Bda06g00159 | Bda-Chr6:2298415 | Bda08g00454 | Bda-Chr8:4700324 | 0 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
16260 | PF02362 | B3 | 3.10E-21 | CL0405 | Bda | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Bda08g00454 | K14486 | - | rcu:8286247 | 856.284 |