Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda08g00470 ATGACCACAGAAGAGGTCGAGAATGATAAATGCGACATGGAAATCGATGGATTTGTGCAGGGTCAAGGGAAAGCACTTTCCAATGGATTCAACGTCGACTATCTCAAAGTTTACTACGCAAAACTTTTTCCACATGCTGATATTTTCAAATGGATGTCATATGGAAATGATGGGAAGCATCCGGCTTGCGATCAATCCTATTGGGGTAGAAGAGAATTTTCGTTTACACTGGAAAATGATCCAGCCAAAAGACATGCGTATGCACAAAGTGGTGATAATGTCTTTACTCCCGTAGAGAGAGAGTTGGTTTTTGATATAGACATGACAGATTATGATGATGTTAGATACTGTTGTTCAGGAGCTGATGTTTGCTTGGACTGCTGGCCGCTAATGACTGCTGCTATCAAAGTTATCGATACTGTCCTCAGAGATGATTTTGGATTCAATCACATTTTATGGGTATATAGTGGTAGACGTGGGGTTCATTGTTGGGTTTGTGATGGGAAAGCAAGAAGGTTATCTAATGAACAGAGGGCAGCTATTGCTGACTATTTTCACTTGTACCAGGGCAATGAAAACAGTCATAAGAAGGTTTCTTTGGGTGGTCAAGGTCTTCATCCGTTTCTTGCGAGATCATATAAGGAAGTTCTCAAGGATATTTTCGAGAAAAAATTGCTCTTGAGGCAAAAAATCTTCTCAACAGATGAGAGATATGAGAAGATCTTGGAAATGATTTCTGACGAGTCCGTTGCCTCAGAGATTCGAGGGAGGTGGCAAGAGAATAAGCGATCATCCTCTTCCAAAGATGACATAAATGTCATACGATGGGAGCAGCTAAAGAAGGTGCTGCAATCAGGGAAGCAACGGACGCAAGGAATTCGAAGGTGTGTAGAGGAAATAGTTTTCTCTTTTACCTACCCGAGGCTGGACATGGAGGTTACAAAACACATGAACCATCTGTTGAAGGCACCATTTTGTGTTCATCCAAAAACAGGTCGTGTATGTGTTCCTATTGATCCAGAAAATTGCGATGAATTTGATCCTACTACTGTCCCAACTCTTTCTCAGCTCCTAGAAGAACTCAATGCCAGTGATAGGAGCTCTGATGTTGATAATGAATTAGATGGAACCTCCCTTGGGAGATCCTTGAGGTTCTTCAGATCTTCATTCTTGCAACCTCTTCTAAAATCGTGCAAGGAGGAAATGGAAAGTCAGTATAACTCCAAATTGCAGCAGTCGAACTCCTTGAGCTGGTAG 1257 41.77 MTTEEVENDKCDMEIDGFVQGQGKALSNGFNVDYLKVYYAKLFPHADIFKWMSYGNDGKHPACDQSYWGRREFSFTLENDPAKRHAYAQSGDNVFTPVERELVFDIDMTDYDDVRYCCSGADVCLDCWPLMTAAIKVIDTVLRDDFGFNHILWVYSGRRGVHCWVCDGKARRLSNEQRAAIADYFHLYQGNENSHKKVSLGGQGLHPFLARSYKEVLKDIFEKKLLLRQKIFSTDERYEKILEMISDESVASEIRGRWQENKRSSSSKDDINVIRWEQLKKVLQSGKQRTQGIRRCVEEIVFSFTYPRLDMEVTKHMNHLLKAPFCVHPKTGRVCVPIDPENCDEFDPTTVPTLSQLLEELNASDRSSDVDNELDGTSLGRSLRFFRSSFLQPLLKSCKEEMESQYNSKLQQSNSLSW 418
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 4897070 4900951 - Bda024922.1 Bda08g00470 11326
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda08g00470 418 Gene3D DNA primase, PRIM domain 22 90 - -
Bda08g00470 418 Gene3D DNA primase, PRIM domain 91 400 - -
Bda08g00470 418 PANTHER DNA PRIMASE SMALL SUBUNIT 80 418 IPR014052 GO:0003896|GO:0006269
Bda08g00470 418 TIGRFAM primase_sml: putative DNA primase, eukaryotic-type, small subunit 74 359 IPR014052 GO:0003896|GO:0006269
Bda08g00470 418 PANTHER DNA PRIMASE SMALL SUBUNIT 41 80 IPR014052 GO:0003896|GO:0006269
Bda08g00470 418 SUPERFAMILY Prim-pol domain 31 363 - -
Bda08g00470 418 Pfam DNA primase small subunit 104 339 IPR002755 GO:0003896|GO:0006269
Bda08g00470 418 CDD AE_Prim_S 44 348 IPR014052 GO:0003896|GO:0006269
Bda08g00470 418 PANTHER DNA PRIMASE 80 418 - -
Bda08g00470 418 PANTHER DNA PRIMASE 41 80 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda08g00470 K02684 - vvi:100260326 670.233