Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda08g00489 ATGAACGACGCTGATGTATCCAAGCAGATCCAGCAGATGGTGAGGTTTATCCGGCAGGAAGCGGAGGAAAAGGCGAATGAAATCTCCGTCTCTGCGGAAGAAGAATTCAACATCGAGAAGTTGCAGCTTGTCGAGGCTGAAAAAAAGAAGATCAGACAAGAGTACGAGAAAAAAGAGAAGCAAGTCGAAGTTAGAAAGAAAATTGAGTATTCCATGCAGCTTAATACTTCTAGAATTAAAGTCCTGCAAGCTCAAGATGACGTTGTTAACTCCATGAAAGAAGCAGCGTCTAAAGAACTTTTGAATGTCAGCCGAGATCGGCACGTATACAAAAATCTCCTCAAAGATCTCATAGTTCAGAGCTTGCTTCGATTGAAAGAGCCGGCTCTATTGTTGCGATGTCGCAAAGACGACCTTCATTTAGTTGAGGATGTGCTACAACGTGCAGCAGATGAATATGCTAAAAAAGCAAATGTTCATCCTCCAGAAATTTTAGTTGACACTCGTGTGTTTCTACCACCTGCTCCAAGCCATCACAATGCCCATGGTCCATATTGCTCTGGAGGTGTGGTGTTGGCATCTCGAGATGGAAAGATCGTTTGTGAAAACACCCTTGATGCAAGGTTGGAAGTTGTTTTCCGCAAAAAACTTCCAGAGGTAATTTTTTATTTCCTGCTGTATAACCTCTATCTTTTTAGTGATATTATCTCGCACTTCTGTGATAGTTGCTCCTTTACTTTGGCAAGCATGGTTATGAACCAGAATTGTTTGTTTTATTTCCACTTGCCTCATTCGATGATGGGAATATATTGGAGTTTTTTTCTAAACCAAAAAAAAAAAAAAGTTTTCAAGAGTAGTTTCTTTTCTTTTCTTTTACAAAATCCTTTTTTAAGAAGTTCTCTGAAGCAGGTCCCACTTTTTTTATTTTTTATTTTTCACTAA 942 39.17 MNDADVSKQIQQMVRFIRQEAEEKANEISVSAEEEFNIEKLQLVEAEKKKIRQEYEKKEKQVEVRKKIEYSMQLNTSRIKVLQAQDDVVNSMKEAASKELLNVSRDRHVYKNLLKDLIVQSLLRLKEPALLLRCRKDDLHLVEDVLQRAADEYAKKANVHPPEILVDTRVFLPPAPSHHNAHGPYCSGGVVLASRDGKIVCENTLDARLEVVFRKKLPEVIFYFLLYNLYLFSDIISHFCDSCSFTLASMVMNQNCLFYFHLPHSMMGIYWSFFLNQKKKKVFKSSFFSFLLQNPFLRSSLKQVPLFLFFIFH 313
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 5005017 5007290 + Bda024940.1 Bda08g00489 11345
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda08g00489 313 Pfam ATP synthase (E/31 kDa) subunit 16 220 IPR002842 GO:0033178|GO:0046961|GO:1902600
Bda08g00489 313 Coils Coil 38 61 - -
Bda08g00489 313 Gene3D - 92 225 IPR038495 -
Bda08g00489 313 PANTHER ATPASE H+-TRANSPORTING V1 SUBUNIT E1A-RELATED 1 243 IPR002842 GO:0033178|GO:0046961|GO:1902600
Bda08g00489 313 Hamap V-type proton ATPase subunit E [atpE]. 8 226 IPR002842 GO:0033178|GO:0046961|GO:1902600
Bda08g00489 313 SUPERFAMILY V-type ATPase subunit E-like 87 221 - -
Bda08g00489 313 Gene3D - 1 62 - -
Bda08g00489 313 PANTHER BNAC03G72900D PROTEIN 1 243 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bda06g00135 Bda08g00489 BCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda06g00135 Bda-Chr6:2050534 Bda08g00489 Bda-Chr8:5005017 1.19E-86 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda08g00489 K02150 - rcu:8287721 374.015