Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Bda08g00511 ATGGGTTTTCCGGTGTGCCATTCTGAACTTCTCTTTCCAAATCTCTTCATCCAGTCACTCTTCATCCTAGTTATTATCAGAAAGCTCGTCAGCGCCATTTTTCGCTCTCTGGGTCTCTCCGATTTTCTCGAACCTGATATTTCTCCGCCACAACAGAGCTACTACCACCATCTCCTCGACGACCCCACCCATTCCTTCCAGTTCGACTCCGCTTCGGCTGCACTGATCCAGAAGATTTTACCCGTTGTAAAGTTCTCGGACTTCGTCGACCCGCCGGAGAACTGCTCCGTTTGCCTCCATGATTTCAAGGCTGACGACGATATCCGACAGCTCGCGAATTGTCGCCACGTGTTTCACCGGAGCTGCGTCGACCGCTGGATGGGTTACGATCAGAAAACTTGCCCTTTATGTCGAACGTCGTTTATTCCGGCGAATTCACGCAGTGGTTTTAACGAGAGGTTTTGGTCTGTTCCTGGTGACTATTCCTACATTACTTGCGCTTTCTAG 507 50.1 MGFPVCHSELLFPNLFIQSLFILVIIRKLVSAIFRSLGLSDFLEPDISPPQQSYYHHLLDDPTHSFQFDSASAALIQKILPVVKFSDFVDPPENCSVCLHDFKADDDIRQLANCRHVFHRSCVDRWMGYDQKTCPLCRTSFIPANSRSGFNERFWSVPGDYSYITCAF 168
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
8 5180809 5181315 + Bda024966.1 Bda08g00511 11367
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Bda08g00511 168 SUPERFAMILY RING/U-box 75 144 - -
Bda08g00511 168 Pfam Ring finger domain 94 138 IPR001841 -
Bda08g00511 168 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 59 143 IPR013083 -
Bda08g00511 168 SMART ring_2 95 137 IPR001841 -
Bda08g00511 168 PANTHER RING ZINC FINGER PROTEIN-RELATED 1 158 - -
Bda08g00511 168 ProSiteProfiles Zinc finger RING-type profile. 95 138 IPR001841 -
Bda08g00511 168 PANTHER BRH1 RING FINGER PROTEIN 1 158 - -
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda03g00991 Bda-Chr3:8976749 Bda08g00511 Bda-Chr8:5180809 1.08E-47 dispersed
Bda07g00159 Bda-Chr7:1971248 Bda08g00511 Bda-Chr8:5180809 5.49E-17 dispersed
Bda08g00511 Bda-Chr8:5180809 Bda01g00419 Bda-Chr1:30723031 1.99E-13 dispersed
Bda14g00663 Bda-Chr14:4991286 Bda08g00511 Bda-Chr8:5180809 7.13E-15 dispersed
Bda08g00511 Bda-Chr8:5180809 Bda08g00140 Bda-Chr8:1319207 4.22E-48 transposed
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda08g00511 K16281 - jre:109014495 201.83