Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda08g00581 ATGGGGGGTTTCACTTCTTTCTTTCTCTTCTTCTTCTTCTTCTTCTTCTTCCCAAGTTTTTTGTTATCAATGGCAGTTCTGGTTTCAGGCTCTAATGATCTATTGGTTCCCACCAAGGTACCCACCGGCCGCCGTCTTCTCACAGTCGACGTCAACGGCTCCGGTGACTTCCGGTCCGTCCAAGAAGCGGTCGATGCAGTTCCAGATTACAATACAGTCAACGTCCACGTCAAAATTAGTCCCGGATATTACGTTGAAAAGGTGGTGGTGCCGGCGACGAAGCCGTACATCACGTTCGAAGGGGCGGGGAGAGGGTCGACGGTGATAGAGTGGCACGACAGGGCCGGCGACCGTGGTACAAATGGGCAGCAGCTGCGTACTTACAGAACTGCTTCTGTCACTGTCTTTGCCAATTACTTCTCTGCCAGAAACATCAGCTTCAAGAATACTGCTCCGGCACCAATGCCGGGAATGGAAGGGTGGCAGGCGGCGGCGTTTCGTATCTCCGGTGACAAAGCGTATTTTTCCGGCTGCGGGTTTTACGGGGCTCAAGACACTCTTTGTGATGACGCCGGCCGCCATTACTTCAAGGACTGTTACATTGAAGGTTCCATCGACTTCATCTTCGGGAATGGCCGATCTATGTACAAAAACTGTGAGCTACACTCAATAGCGACGAGATTCGGGTCAATAGCGGCCCAAGATAGAAACTGGCCCCACGAGAAAACGGGTTTTGCTTTCGTGGGTTGCAAGGTGACGGGTACTGGGCCTGTTTATGTGGGTCGGGCCATGGGGCAGTACTCTCGGATTGTGTACGCCTACACTTACTTTGACGACGTGGTGGCAGATGGCGGCTGGGATGACTGGGACCACGTCAGCAACAAAAATAAGACTGTATTTTTTGGAGTGTACAAGTGCTGGGGGCCAGGAGCAGGAGCAGTGGGCGGGCGGGGGGTATCTTGGGCGCGAGAGCTGGATTTTGAGTCGGCTCATCCGTTTCTTAAGAAGAGCTTCGTCAATGGAAGACACTGGATTGCGCCATCGGATGCTTAG 1053 52.9 MGGFTSFFLFFFFFFFFPSFLLSMAVLVSGSNDLLVPTKVPTGRRLLTVDVNGSGDFRSVQEAVDAVPDYNTVNVHVKISPGYYVEKVVVPATKPYITFEGAGRGSTVIEWHDRAGDRGTNGQQLRTYRTASVTVFANYFSARNISFKNTAPAPMPGMEGWQAAAFRISGDKAYFSGCGFYGAQDTLCDDAGRHYFKDCYIEGSIDFIFGNGRSMYKNCELHSIATRFGSIAAQDRNWPHEKTGFAFVGCKVTGTGPVYVGRAMGQYSRIVYAYTYFDDVVADGGWDDWDHVSNKNKTVFFGVYKCWGPGAGAVGGRGVSWARELDFESAHPFLKKSFVNGRHWIAPSDA 350
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 5911296 5912986 + Bda029043.1 Bda08g00581 11437
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda08g00581 350 PANTHER ACYL-COA THIOESTER HYDROLASE YBHC-RELATED 38 349 - -
Bda08g00581 350 ProSitePatterns Pectinesterase signature 2. 201 210 IPR033131 -
Bda08g00581 350 Gene3D - 43 349 IPR012334 -
Bda08g00581 350 Pfam Pectinesterase 48 341 IPR000070 GO:0030599|GO:0042545
Bda08g00581 350 SUPERFAMILY Pectin lyase-like 45 347 IPR011050 -
Bda08g00581 350 PANTHER PECTINESTERASE 68-RELATED 38 349 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda04g00693 Bda-Chr4:55760687 Bda08g00581 Bda-Chr8:5911296 3.64E-81 dispersed
Bda07g01340 Bda-Chr7:16154536 Bda08g00581 Bda-Chr8:5911296 8.95E-66 dispersed
Bda08g00581 Bda-Chr8:5911296 Bda12g01018 Bda-Chr12:41759977 2.07E-58 dispersed
Bda08g00581 Bda-Chr8:5911296 Bda03g01701 Bda-Chr3:56428546 7.77E-88 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda08g00581 - - cmo:103483059 558.525