Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda08g00622 ATGGGAAGTGGATTGTCGAGCCTCGTCTCGTGCCTGAAACCGGTGAACCGGACGGATGGACAGCCGGAGCAGAATCCGACCCACCAGCAGGAAGTGGTCTTCGCGGCCTCTGAGACTCTGGATGAAACCCTAGGCCACTCCTTCTGCTACGTCCGCTCTTCGGCTCGCTTCCTCTCCCCGACTCCCTCCGATCGTTTTCTGACCCCTTCTCATTCTCTCCGTTTCTCGCCTTCTCATGAACCCGCCGTCCAGAGGACTCGACCGCCGGTTCCGGAGACCGGGTTCAAGGCCATTTCCGGAGCTTCTGTCAGTGCGAATAGCGCTACTCCCAGATCTGTCCTCTTGCTTGACAATATTTACGATGATGCCACTGAGAGTACGTTTGGTACCGGCGGCGGTGTGAGAGGGAGTATCGTGAATGGTTTCGAGAGTACGTCGTCATTTTGTGCTCTTCCTCTTCAGACGGTTCCCAGAGGTGGAGCTGAGCCGTCGGGTCCAATGGAGCGGGGTGGATTCTTTCTGTCTGGTCCGATCGAGCGGGGCGCTCTCTCTGGTCCACTAGAAGCTAACACTGGCTCTGATGGAAGTGGGAGAGTTCCCTTCTCGGCTCCGCTCGGTGGGCTTTATGTAAAGAAAAGACGAAAGAAGGGAATTTCAGGTATTCGGAAGGCCTTCTACCGGAACTTCTCGGAGAAGAGGCCGTGGGTGGTGCCCGTGCTCAATTTTGCATTCAGGAAGGAAGACGGGGCTGCCAGGGATGAGTCGGAGCCAAAGAATGAGAGTGATGTTCAATGGGCTCTTGGGAAGGCCGGAGAGGATAGAGTGCATGTGGTTGTATCCGAAGAGCAAGGATGGTTGTTTGTGGGGATTTATGATGGGTTTAATGGTCCTGATGGTCCCGAATTTTTGATGGGTAATCTGTATCGGGCTGTATATAATGAGCTTCAGGGTTTGTTTTGGGATGTTGAAGAGGCAGAGGAGCCTTCTGATGTTAATCATACTAATGCAGCAACAGAACATGCATTGGATGATGCTGGGCAAGTAGTTGACAAAGGTGGTGATGTTTCATCAGGGTTTAATGGTTCACAACTTCCCACTGCTGGATCGGCCAAAAGAGTTACATTTCAATCAGAGGAAGGATCTGAAACTAGGAGTAGAAGGCGGCTTTGGGAATTTTTGGCAGAGGAGGATCCGGAATATGGGCTTGATCTTTCAGGATCAGATAGATTTGCATTTTCAGTCGATGATGCGCTTAGTGTAAGCAATGCAGGTTCAGCAGCTGGAAGGCGGTGGCTGCTGTTGTCTAAATTGAAACATGGGTGGTCTAAGCACAAGGAAGGTCATGGTAGAAAGTTGTTTTCATGGAGTTTTAGATTAGAGGATAAAGAGAAGGTTGAGGTTGAGAATAAGGTAGAGGAGAGGCCATTGCGTACTGGTAAGAAGAGGAAGGAGGGTCCAGTGGATCATGGGTTGGTTTTGGGAGCATTATCACGGGCTTTGGAAGTAACTGAGTTAGCTTATTTGGATATGACAGACAAGGTACTTGATACAAACCCTGAGCTTGCATTGATGGGATCCTGCCTGTTGGTTGTGTTAATGAGAGATGAGGATGTGTATGTCATGAATGTTGGCGATAGTCGGGCAATTGTTGCCCAGTTTGAACCGCAAGAAGTTGGTCATTGTGCCGAGTCGGTGGAACAGGGTGAAGAAAGATCTCAAATGGAAGGTATAATGGAGGAATCATCAGCTACGAGTGGAAGGGACAATGCCAAAGCGATAACATCCAGAAATGAATTTTCTAGGCAAGAAATAAGTTTGATTGCATTGCAATTATCAACTGATCATAGCACAAGCATTGAAGATGAAGTCACAAGGATAAAGAATGAACATCCGGATGACAAACACTGTATCGTTAATGATAGAGTGAAAGGTCGTCTCAAGGTTACAAGGGCATTTGGCGCAGGATTTCTTAAACAGCAGCCGAAGTTGAATGATGCATTGTTGGAAATGTTTCGCAATGAATATATAGGCACTGCACCATACCTATCCTGCTCACCTTCTCTTTGCCACCACAGACTTTGTCCGACAGATCAGTTCTTAGTGCTCTCATCCGACGGTCTATACCAGTACCTAAGCAATCAGGAAGTAGTTTCTCATGTGCAAAATTTTATGGAGAAGTTTCCAGATGGAGACCCTGCTCAACACTTAATAGAGGAACTTCTTTTCCGTGCAGCCAAAAAAGCTGGGATGGATTTTCATGAATTATTGGACATCCCCCAGGGAGATCGTCGTAAATATCACGACGATGTGACTGTGATGGTTATTTCGCTTGAAGGAAGAATTTGGAAATCCTCAGGGAAGTACCTT 2367 47.95 MGSGLSSLVSCLKPVNRTDGQPEQNPTHQQEVVFAASETLDETLGHSFCYVRSSARFLSPTPSDRFLTPSHSLRFSPSHEPAVQRTRPPVPETGFKAISGASVSANSATPRSVLLLDNIYDDATESTFGTGGGVRGSIVNGFESTSSFCALPLQTVPRGGAEPSGPMERGGFFLSGPIERGALSGPLEANTGSDGSGRVPFSAPLGGLYVKKRRKKGISGIRKAFYRNFSEKRPWVVPVLNFAFRKEDGAARDESEPKNESDVQWALGKAGEDRVHVVVSEEQGWLFVGIYDGFNGPDGPEFLMGNLYRAVYNELQGLFWDVEEAEEPSDVNHTNAATEHALDDAGQVVDKGGDVSSGFNGSQLPTAGSAKRVTFQSEEGSETRSRRRLWEFLAEEDPEYGLDLSGSDRFAFSVDDALSVSNAGSAAGRRWLLLSKLKHGWSKHKEGHGRKLFSWSFRLEDKEKVEVENKVEERPLRTGKKRKEGPVDHGLVLGALSRALEVTELAYLDMTDKVLDTNPELALMGSCLLVVLMRDEDVYVMNVGDSRAIVAQFEPQEVGHCAESVEQGEERSQMEGIMEESSATSGRDNAKAITSRNEFSRQEISLIALQLSTDHSTSIEDEVTRIKNEHPDDKHCIVNDRVKGRLKVTRAFGAGFLKQQPKLNDALLEMFRNEYIGTAPYLSCSPSLCHHRLCPTDQFLVLSSDGLYQYLSNQEVVSHVQNFMEKFPDGDPAQHLIEELLFRAAKKAGMDFHELLDIPQGDRRKYHDDVTVMVISLEGRIWKSSGKYL 789
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 6381269 6386145 + Bda034007 Bda08g00622 11478
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda08g00622 789 MobiDBLite consensus disorder prediction 358 376 - -
Bda08g00622 789 Gene3D - 242 784 IPR036457 -
Bda08g00622 789 ProSiteProfiles PPM-type phosphatase domain profile. 257 777 IPR001932 -
Bda08g00622 789 MobiDBLite consensus disorder prediction 358 380 - -
Bda08g00622 789 MobiDBLite consensus disorder prediction 565 589 - -
Bda08g00622 789 PANTHER PROTEIN PHOSPHATASE 2C 26 787 IPR015655 GO:0004722|GO:0006470
Bda08g00622 789 SUPERFAMILY PP2C-like 268 778 IPR036457 -
Bda08g00622 789 SMART PP2C_4 256 775 IPR001932 -
Bda08g00622 789 CDD PP2Cc 488 777 IPR001932 -
Bda08g00622 789 Pfam Protein phosphatase 2C 609 739 IPR001932 -
Bda08g00622 789 PANTHER PROTEIN PHOSPHATASE 2C 29 26 787 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bda06g01276 Bda08g00622 BCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda06g01285 Bda-Chr6:43426806 Bda08g00622 Bda-Chr8:6381269 0 dispersed
Bda08g00622 Bda-Chr8:6381269 Bda09g01506 Bda-Chr9:46826262 7.12E-39 dispersed
Bda11g00528 Bda-Chr11:5564139 Bda08g00622 Bda-Chr8:6381269 1.05E-13 transposed
Bda06g01276 Bda-Chr6:43367904 Bda08g00622 Bda-Chr8:6381269 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda08g00622 - - jre:108994087 1136.71