Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda08g00632 ATGGAAGCTCTTTTCTCCAACGACTTCTTTAACTTCATAATCTACGACACCATCTCTGCAACCCCATATTATTCTCAAGACCCTTCAGACAACGCAAATTTCTTACAAGATACTAATTTTGTACCTCGAGATCCAGAAGTTTCAACAGAGAGCTGCTCATCAAAGCTCGGAAAAAGCGTTCTGTGCCGGCCGGAAAACTCCGACAGCAGCCGACATTTCGGGTCGCGAAGCCAGAAAAGGCGGAGAAGAAAGGCAAGAGTGTTTAAAAATAGAGAGCAGATGGAAACTCAAAGGATGACTCACATCGCTGTTGAAAGAAACAGAAGAAAACAAATGAATGAACATCTTGCTGTCTTACGTTCTCTCATGCCTGAATCCTATGCTCAAAGGGGTGATCAAACCTCAATTGTAGGGGGTGCCATAGAGTTTGTGAAGGAACTTGAGCATCTGTTACAGACCCTTGAATCCCAAAAGCTGCAACTTGAGCTACAAAAAAGACAAGATCAAAGCCAAATTGAAGAGAAAACTGACAATAAAATGATATTCTCACCTCCCTTCTCACAATTCTTTGTGAACCCACAATTCAACTGGTCTCAAAACCCTAACAAAACTGTACAAGAATCTACTGCCATGGCTGTAGCTGATGTGGAAGTGACTTTGATTGAAACCCATGCAAATCTCAGAATCCTCTCCAGAAAAAACCCTAAAAATCTCTCCATTTTGGTTGCTGGTTTTCAAGCTCTCTATTTTACAGTTCTCCATCTCAATGTCACCACCATCAACCCTCTTGTTCTTTACTCCATTAGTGCCAAGGTGGAAGAGAAATGTCAATTGAGGTGTGTTGATGACATTGCAGCTGGAGTTCACCAGATGCTTAGTAGAATAATGGAAGAAGAAGGATATTTACATTGA 912 41.45 MEALFSNDFFNFIIYDTISATPYYSQDPSDNANFLQDTNFVPRDPEVSTESCSSKLGKSVLCRPENSDSSRHFGSRSQKRRRRKARVFKNREQMETQRMTHIAVERNRRKQMNEHLAVLRSLMPESYAQRGDQTSIVGGAIEFVKELEHLLQTLESQKLQLELQKRQDQSQIEEKTDNKMIFSPPFSQFFVNPQFNWSQNPNKTVQESTAMAVADVEVTLIETHANLRILSRKNPKNLSILVAGFQALYFTVLHLNVTTINPLVLYSISAKVEEKCQLRCVDDIAAGVHQMLSRIMEEEGYLH 303
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 6507919 6509719 - Bda029094.1 Bda08g00632 11488
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda08g00632 303 MobiDBLite consensus disorder prediction 60 92 - -
Bda08g00632 303 Gene3D - 87 178 IPR036638 GO:0046983
Bda08g00632 303 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 96 147 IPR011598 GO:0046983
Bda08g00632 303 Coils Coil 144 178 - -
Bda08g00632 303 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 96 167 IPR036638 GO:0046983
Bda08g00632 303 CDD bHLH_AtFAMA_like 99 158 - -
Bda08g00632 303 PANTHER MAX DIMERIZATION, MAD 1 299 - -
Bda08g00632 303 PANTHER TRANSCRIPTION FACTOR BHLH71 1 299 - -
Bda08g00632 303 Pfam Helix-loop-helix DNA-binding domain 97 148 IPR011598 GO:0046983
Bda08g00632 303 SMART finulus 102 153 IPR011598 GO:0046983
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bda06g01272 Bda08g00632 BCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda08g00632 Bda-Chr8:6507919 Bda11g00398 Bda-Chr11:4316949 3.04E-55 dispersed
Bda07g01246 Bda-Chr7:15306859 Bda08g00632 Bda-Chr8:6507919 1.48E-70 transposed
Bda06g01272 Bda-Chr6:43303342 Bda08g00632 Bda-Chr8:6507919 1.54E-123 wgd
Bda06g01292 Bda-Chr6:43526317 Bda08g00632 Bda-Chr8:6507919 9.36E-126 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
16284 PF00010 HLH 3.50E-10 No_clan Bda TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda08g00632 - - pvu:PHAVU_003G284500g 317.39