Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Bda08g00632 | ATGGAAGCTCTTTTCTCCAACGACTTCTTTAACTTCATAATCTACGACACCATCTCTGCAACCCCATATTATTCTCAAGACCCTTCAGACAACGCAAATTTCTTACAAGATACTAATTTTGTACCTCGAGATCCAGAAGTTTCAACAGAGAGCTGCTCATCAAAGCTCGGAAAAAGCGTTCTGTGCCGGCCGGAAAACTCCGACAGCAGCCGACATTTCGGGTCGCGAAGCCAGAAAAGGCGGAGAAGAAAGGCAAGAGTGTTTAAAAATAGAGAGCAGATGGAAACTCAAAGGATGACTCACATCGCTGTTGAAAGAAACAGAAGAAAACAAATGAATGAACATCTTGCTGTCTTACGTTCTCTCATGCCTGAATCCTATGCTCAAAGGGGTGATCAAACCTCAATTGTAGGGGGTGCCATAGAGTTTGTGAAGGAACTTGAGCATCTGTTACAGACCCTTGAATCCCAAAAGCTGCAACTTGAGCTACAAAAAAGACAAGATCAAAGCCAAATTGAAGAGAAAACTGACAATAAAATGATATTCTCACCTCCCTTCTCACAATTCTTTGTGAACCCACAATTCAACTGGTCTCAAAACCCTAACAAAACTGTACAAGAATCTACTGCCATGGCTGTAGCTGATGTGGAAGTGACTTTGATTGAAACCCATGCAAATCTCAGAATCCTCTCCAGAAAAAACCCTAAAAATCTCTCCATTTTGGTTGCTGGTTTTCAAGCTCTCTATTTTACAGTTCTCCATCTCAATGTCACCACCATCAACCCTCTTGTTCTTTACTCCATTAGTGCCAAGGTGGAAGAGAAATGTCAATTGAGGTGTGTTGATGACATTGCAGCTGGAGTTCACCAGATGCTTAGTAGAATAATGGAAGAAGAAGGATATTTACATTGA | 912 | 41.45 | MEALFSNDFFNFIIYDTISATPYYSQDPSDNANFLQDTNFVPRDPEVSTESCSSKLGKSVLCRPENSDSSRHFGSRSQKRRRRKARVFKNREQMETQRMTHIAVERNRRKQMNEHLAVLRSLMPESYAQRGDQTSIVGGAIEFVKELEHLLQTLESQKLQLELQKRQDQSQIEEKTDNKMIFSPPFSQFFVNPQFNWSQNPNKTVQESTAMAVADVEVTLIETHANLRILSRKNPKNLSILVAGFQALYFTVLHLNVTTINPLVLYSISAKVEEKCQLRCVDDIAAGVHQMLSRIMEEEGYLH | 303 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
8 | 6507919 | 6509719 | - | Bda029094.1 | Bda08g00632 | 11488 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Bda08g00632 | 303 | MobiDBLite | consensus disorder prediction | 60 | 92 | - | - | |
Bda08g00632 | 303 | Gene3D | - | 87 | 178 | IPR036638 | GO:0046983 | |
Bda08g00632 | 303 | ProSiteProfiles | Myc-type, basic helix-loop-helix (bHLH) domain profile. | 96 | 147 | IPR011598 | GO:0046983 | |
Bda08g00632 | 303 | Coils | Coil | 144 | 178 | - | - | |
Bda08g00632 | 303 | SUPERFAMILY | HLH, helix-loop-helix DNA-binding domain | 96 | 167 | IPR036638 | GO:0046983 | |
Bda08g00632 | 303 | CDD | bHLH_AtFAMA_like | 99 | 158 | - | - | |
Bda08g00632 | 303 | PANTHER | MAX DIMERIZATION, MAD | 1 | 299 | - | - | |
Bda08g00632 | 303 | PANTHER | TRANSCRIPTION FACTOR BHLH71 | 1 | 299 | - | - | |
Bda08g00632 | 303 | Pfam | Helix-loop-helix DNA-binding domain | 97 | 148 | IPR011598 | GO:0046983 | |
Bda08g00632 | 303 | SMART | finulus | 102 | 153 | IPR011598 | GO:0046983 |
Event-related genes

Select | Gene_1 | Gene_2 | Event_name |
---|---|---|---|
Bda06g01272 | Bda08g00632 | BCT |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Bda08g00632 | Bda-Chr8:6507919 | Bda11g00398 | Bda-Chr11:4316949 | 3.04E-55 | dispersed | |
Bda07g01246 | Bda-Chr7:15306859 | Bda08g00632 | Bda-Chr8:6507919 | 1.48E-70 | transposed | |
Bda06g01272 | Bda-Chr6:43303342 | Bda08g00632 | Bda-Chr8:6507919 | 1.54E-123 | wgd | |
Bda06g01292 | Bda-Chr6:43526317 | Bda08g00632 | Bda-Chr8:6507919 | 9.36E-126 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
16284 | PF00010 | HLH | 3.50E-10 | No_clan | Bda | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Bda08g00632 | - | - | pvu:PHAVU_003G284500g | 317.39 |