Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda08g00650 ATGTTTAGATGCATAGTCTGTACGCCGCAGACGAAAGACGATGGCGGAGATGCCGGTGGAAGTACGACGCCGCCCGGTTCGAAAGAAGCTGTCAAAAGCCTTACCACCCAGATAAAGGGTATGGCATTGAAATTCTCTGGAGCTTATCGACAAGGAAGAACATCTCCGGGCCCGAGCAGCTACAGAAAAGGACAGAGACCTTACCCCGATTTCGCTTCGGAAGGGATTCCGTATCCATTTTTCGGCGGTGCGAGTTCGAGTTCGACCCCTGCATGGGATTTCACGAGTTCTAGGCGCCAGCCAACTGCAAGAGGTGATGACAAGCTAGCGTCTGCTAATGATGTGGTTCTTGATGATGACAATGAGCCCAAGGAATGGATGGCACAGGTAGAGCCAGGAGTCCACATTACATTTGTGTCTCTTCCGGACGGCGGTAATGATCTACGACGGATTCGCTTCAGCCGAGAAATGTTCGATAAATGGCAAGCTCAGCGATGGTGGGGCGAGAACTATGACCGAATAATGGAGCTATACAATGTACAAAGATTCAATCGACAAGCTCTTCATACTCCGCCTAGGTCGGAAGACGAGAAACTCCCTACAGCTAATCAATGCTATTTACATCAGCTTCAGAGGGATTCATCTTACTCAATGATTGCGGCATCGGCTCGGGAGAGTCCGATGACTTCATCCATGCACAAGGAATGGATGCCTAGGACTAAAAGCGGCGGCCAAAATTACAATTCCGGGGCAAGTTCTTACGGCGCAGGCTATCACAAAGGAGAGGTTTCGTCTTTCGAAGCATCAAGGACGACAACCTCTTCCAGAGACGAAGCTTCGGTCTCCGTCAGCAATGCCAGCGACTTAGAGGCGGAGTGGGTGGAAGAAGATGAGCCTGGAGTTTACATAACGATCAGACAACTAGCTGACGGTACGAGAGAGCTCCGTCGAGTCCGATTCAGTCGGGAAAAGTTCGGGGAGACGAATGCGAAGCAGTGGTGGGAAGAGAATAGAGAGAGGATACAAGCTCAGTACCTGTAA 1041 50.53 MFRCIVCTPQTKDDGGDAGGSTTPPGSKEAVKSLTTQIKGMALKFSGAYRQGRTSPGPSSYRKGQRPYPDFASEGIPYPFFGGASSSSTPAWDFTSSRRQPTARGDDKLASANDVVLDDDNEPKEWMAQVEPGVHITFVSLPDGGNDLRRIRFSREMFDKWQAQRWWGENYDRIMELYNVQRFNRQALHTPPRSEDEKLPTANQCYLHQLQRDSSYSMIAASARESPMTSSMHKEWMPRTKSGGQNYNSGASSYGAGYHKGEVSSFEASRTTTSSRDEASVSVSNASDLEAEWVEEDEPGVYITIRQLADGTRELRRVRFSREKFGETNAKQWWEENRERIQAQYL 346
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 6759120 6761858 + Bda029112.1 Bda08g00650 11506
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda08g00650 346 MobiDBLite consensus disorder prediction 227 248 - -
Bda08g00650 346 MobiDBLite consensus disorder prediction 45 74 - -
Bda08g00650 346 PANTHER PROTEIN BREVIS RADIX-LIKE 1 1 346 IPR044532 -
Bda08g00650 346 PANTHER PROTEIN BREVIS RADIX-LIKE 1 1 346 - -
Bda08g00650 346 MobiDBLite consensus disorder prediction 8 31 - -
Bda08g00650 346 ProSiteProfiles BRX domain profile. 291 346 IPR013591 -
Bda08g00650 346 Pfam Transcription factor BRX N-terminal domain 21 51 IPR027988 -
Bda08g00650 346 Pfam Transcription factor regulating root and shoot growth via Pin3 290 345 IPR013591 -
Bda08g00650 346 Pfam Transcription factor regulating root and shoot growth via Pin3 124 178 IPR013591 -
Bda08g00650 346 MobiDBLite consensus disorder prediction 86 111 - -
Bda08g00650 346 ProSiteProfiles BRX domain profile. 124 179 IPR013591 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bda07g00143 Bda08g00650 CCT
Bda06g01229 Bda08g00650 BCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda07g00143 Bda-Chr7:1759668 Bda08g00650 Bda-Chr8:6759120 6.59E-10 dispersed
Bda08g00650 Bda-Chr8:6759120 Bda09g00653 Bda-Chr9:9797709 2.99E-131 dispersed
Bda06g01229 Bda-Chr6:42357103 Bda08g00650 Bda-Chr8:6759120 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda08g00650 - - zju:107434375 494.967