Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda08g00658 ATGGCTAGCTCGTGGAGAGCGCGCGAGTCTCTGATCGTGTTGGCAATCGTTTGCCTTGGCTGTTTATTTGCAATTTCAATTGCAAAAGAGGAAACAACTAAGTTGGGGACAGTCATTGGAATAGACCTCGGCACTACATACTCGTGTGTTGGTGTATACAAAAATGGTCACGTTGAAATTATAGCAAATGACCAAGGAAATCGTATCACTCCCTCATGGGTTGCTTTCACAGAAAGTGAGAGACTTATTGGTGAGGCCGCAAAAAATCAAGCGGCTGTCAACCCAGAAAGAACCATTTTTGACGTCAAGAGACTTATCGGAAGAAAGTTTGAGGACAAGGAAGTACAGAAAGACATGAAGCTTGTTCCGTATAAGATTGTTAACAAAGATGGGAAACCATATATTCAGGTGCAGATCAATAATGGTGAAACAAAGGTTTTTAGCCCTGAAGAGATCAGTGCCATGATTCTGATTAAGATGAAGGAAACTGCGGAAGCATTCCTTGGGAAGAAAATCAAGGATGCTGTTGTGACGGTTCCCGCTTACTTCAATGACGCCCAGAGGCAGGCTACTAAGGATGCAGGCGTGATTGCTGGGCTTAATGTTGCTAGAATCATAAATGAACCTACTGCAGCTGCCATCGCTTATGGTCTGGACAAGAAAGGTGGTGAGAAAAACATTCTTGTGTTTGATCTGGGAGGTGGGACATTCGATGTCAGTGTTTTGACTATCGACAATGGTGTTTTTGAGGTTCTGGCCACAAATGGAGACACTCATTTAGGAGGTGAAGATTTTGATCAGAGAATAATGGAATACTTCATTAAATTGATCAAGAAGAAGCATGGAAAGGATATCAGCAAGGACAACAGAGCACTTGGGAAATTGAGAAGAGAGGCTGAGCGTGCCAAGAGAGCTTTGAGTAGTCAACACCAGGTCCGAGTTGAGATTGAATCACTTTTTGATGGTGTCGATTTCTCTGAGCCATTGACGCGAGCTCGATTTGAAGAGCTGAACAATGACTTGTTCAGAAAAACCATGGGACCAGTGAAAAAGGCAATGGAAGATGCTGGATTGGAAAAGAACCAGATAGATGAGATTGTCCTTGTCGGTGGAAGCACACGAATTCCAAAAGTTCAACAGCTTCTTAAGGACTATTTTGATGGGAAGGAACCCAACAAGGGAGTGAATCCTGATGAGGCTGTCGCATATGGTGCTGCAGTACAAGGAAGCATCTTGAGTGGAGAGGGCGGTGAAGAAACTAAAGATATCCTTCTTCTTGATGTTGCTCCTCTCACCCTTGGAATCGAGACTGTTGGTGGGGTGATGACCAAGTTGATTCCAAGAAACACTGTTATCCCCACCAAGAAATCTCAGGTCTTCACCACATACCAGGATCAACAGACTACTGTCTCGATTCAGGTCTTCGAAGGTGAAAGAAGTCTGACCAAGGATTGCAGAAATCTGGGGAAATTCGATTTGAGTGGAATTCCTCCAGCTCCAAGGGGAACCCCTCAAATAGAAGTCACATTCGAAGTCGATGCAAATGGTATCCTTAACGTGAAAGCTGAAGACAAAGGAACAGGAAAGTCGGAGAAGATCACAATCACCAACGACAAAGGCAGACTGAGCCAGGAGGAGATTGAGCGAATGGTCCGGGAAGCCGAAGAGTTTGCAGAGGAAGACAAGAAGGTTAAGGAGAGAATCGACGCGAGAAACAGCCTCGAGACCTACGTCTACAACATGAAGAACCAGATCAATGACAAAGATAAGCTTGCAGACAAGCTCGAATCTGATGAGAAAGACAAGATCGAGGCTGCAGTGAAGGAGGCACTCGAGTGGCTAGACGACAATCAAAGTGCTGAGAAGGAGGACTACGAAGAGAAGCTCAAAGAGGTCGAAGCCGTGTGCAACCCCATCATCACCGCCATTTATCAGAGGTCTGGTGGCCCGACATCGGGCGGATCGGCCGAAGATGAAGATGAATCTCATGATGAGCTTTGA 2001 45.33 MASSWRARESLIVLAIVCLGCLFAISIAKEETTKLGTVIGIDLGTTYSCVGVYKNGHVEIIANDQGNRITPSWVAFTESERLIGEAAKNQAAVNPERTIFDVKRLIGRKFEDKEVQKDMKLVPYKIVNKDGKPYIQVQINNGETKVFSPEEISAMILIKMKETAEAFLGKKIKDAVVTVPAYFNDAQRQATKDAGVIAGLNVARIINEPTAAAIAYGLDKKGGEKNILVFDLGGGTFDVSVLTIDNGVFEVLATNGDTHLGGEDFDQRIMEYFIKLIKKKHGKDISKDNRALGKLRREAERAKRALSSQHQVRVEIESLFDGVDFSEPLTRARFEELNNDLFRKTMGPVKKAMEDAGLEKNQIDEIVLVGGSTRIPKVQQLLKDYFDGKEPNKGVNPDEAVAYGAAVQGSILSGEGGEETKDILLLDVAPLTLGIETVGGVMTKLIPRNTVIPTKKSQVFTTYQDQQTTVSIQVFEGERSLTKDCRNLGKFDLSGIPPAPRGTPQIEVTFEVDANGILNVKAEDKGTGKSEKITITNDKGRLSQEEIERMVREAEEFAEEDKKVKERIDARNSLETYVYNMKNQINDKDKLADKLESDEKDKIEAAVKEALEWLDDNQSAEKEDYEEKLKEVEAVCNPIITAIYQRSGGPTSGGSAEDEDESHDEL 666
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 6863907 6867675 + Bda029119.1 Bda08g00658 11514
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda08g00658 666 PRINTS 70kDa heat shock protein signature 235 245 - -
Bda08g00658 666 PRINTS 70kDa heat shock protein signature 37 50 - -
Bda08g00658 666 PRINTS 70kDa heat shock protein signature 87 95 - -
Bda08g00658 666 PRINTS 70kDa heat shock protein signature 175 195 - -
Bda08g00658 666 PRINTS 70kDa heat shock protein signature 363 379 - -
Bda08g00658 666 PRINTS 70kDa heat shock protein signature 395 415 - -
Bda08g00658 666 PRINTS 70kDa heat shock protein signature 422 441 - -
Bda08g00658 666 PRINTS 70kDa heat shock protein signature 65 77 - -
Bda08g00658 666 PRINTS 70kDa heat shock protein signature 503 519 - -
Bda08g00658 666 SUPERFAMILY Heat shock protein 70kD (HSP70), peptide-binding domain 418 575 IPR029047 -
Bda08g00658 666 ProSitePatterns Heat shock hsp70 proteins family signature 2. 229 242 IPR018181 -
Bda08g00658 666 Gene3D Substrate Binding Domain Of DNAk; Chain A, domain 1 417 571 IPR029047 -
Bda08g00658 666 ProSitePatterns Heat shock hsp70 proteins family signature 1. 41 48 IPR018181 -
Bda08g00658 666 Coils Coil 603 635 - -
Bda08g00658 666 PANTHER LUMINAL-BINDING PROTEIN 23 653 - -
Bda08g00658 666 PANTHER HEAT SHOCK PROTEIN 70KDA 23 653 IPR013126 GO:0005524|GO:0140662
Bda08g00658 666 Coils Coil 581 601 - -
Bda08g00658 666 SUPERFAMILY Actin-like ATPase domain 223 414 IPR043129 -
Bda08g00658 666 Gene3D - 39 410 - -
Bda08g00658 666 Gene3D - 572 646 IPR029048 -
Bda08g00658 666 SUPERFAMILY Actin-like ATPase domain 36 220 IPR043129 -
Bda08g00658 666 SUPERFAMILY Heat shock protein 70kD (HSP70), C-terminal subdomain 569 651 IPR029048 -
Bda08g00658 666 Coils Coil 285 305 - -
Bda08g00658 666 MobiDBLite consensus disorder prediction 644 666 - -
Bda08g00658 666 Pfam Hsp70 protein 38 645 IPR013126 GO:0005524|GO:0140662
Bda08g00658 666 ProSitePatterns Heat shock hsp70 proteins family signature 3. 366 380 IPR018181 -
Bda08g00658 666 Coils Coil 547 567 - -
Bda08g00658 666 CDD HSPA5-like_NBD 36 410 IPR042050 -
Bda08g00658 666 Gene3D Actin; Chain A, domain 4 261 344 - -
Bda08g00658 666 Gene3D - 221 395 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda02g00813 Bda-Chr2:48756502 Bda08g00658 Bda-Chr8:6863907 0 dispersed
Bda08g00658 Bda-Chr8:6863907 Bda15g00221 Bda-Chr15:4939002 0 dispersed
Bda09g01104 Bda-Chr9:41546982 Bda08g00658 Bda-Chr8:6863907 0 dispersed
Bda11g00113 Bda-Chr11:1530228 Bda08g00658 Bda-Chr8:6863907 0 transposed
Bda04g01149 Bda-Chr4:62273088 Bda08g00658 Bda-Chr8:6863907 4.68E-11 transposed
Bda06g01222 Bda-Chr6:42165182 Bda08g00658 Bda-Chr8:6863907 0 wgd
Bda06g01138 Bda-Chr6:40340603 Bda08g00658 Bda-Chr8:6863907 3.75E-178 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda08g00658 K09490 - jre:109002071 1249.19