Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda08g00710 ATGGCCGGTCAATCTGATCCTCATCTCTCTCTATTTTCACCTGAGGAGGTAGAGTTTGTGGCTGAAGATGAGATCGTTGAAATTGTTCCTAACATGAGAATGGATTCCCTCAATTTGATCTGTGGTGATTATGGTCCATTCTTCCCTCAACTAGTGGCTCAAGTACCGTTGTGGTTAGCAATTGCTTTGAAAAAGAGAGGGAAATGTGCTATCCGGTCTCCAGAATGGATGTCTATCGAAAAGTTGACTCAGATTTTAGAAGCAGAACGAGAGTCTCAAGGAGCATTCCAGATACTACCATTTCATTATGTGGAAATCTCAAAGCTTCTTTTTGACTATGCACATAACGACATACAAGACATATACATGGTGAGATCTCTTGTTGAAGATATTAAAGATGTTAGGTTTCACAAGGTTGAAACTAGCTTAGAGGCAATTGATACACGAACATCTGCAGTAAAGATTAAAGATCTGTCTGCCATGGAAGTAAATATTGTTCGCCCATTTGTTATCAGATCACTGCAAGCAATCTATAATCATGGTAGCCCAAAGTTGGTTCCAGACCAAGAGAGGGTGTCTGGCAGAGTACAGCAAGAGCATAATCCTCGTCAAAAAGTAAGTTCTTTTCTA 630 40.16 MAGQSDPHLSLFSPEEVEFVAEDEIVEIVPNMRMDSLNLICGDYGPFFPQLVAQVPLWLAIALKKRGKCAIRSPEWMSIEKLTQILEAERESQGAFQILPFHYVEISKLLFDYAHNDIQDIYMVRSLVEDIKDVRFHKVETSLEAIDTRTSAVKIKDLSAMEVNIVRPFVIRSLQAIYNHGSPKLVPDQERVSGRVQQEHNPRQKVSSFL 210
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 7876721 7878742 - Bda034021 Bda08g00710 11566
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda08g00710 210 CDD GINS_A_psf2 66 182 - -
Bda08g00710 210 Gene3D - 78 191 - -
Bda08g00710 210 Gene3D - 12 77 - -
Bda08g00710 210 SUPERFAMILY GINS helical bundle-like 74 181 IPR036224 -
Bda08g00710 210 PIRSF GINS_PSF2 2 208 IPR007257 GO:0005634|GO:0006260
Bda08g00710 210 Pfam GINS complex protein 54 162 IPR021151 -
Bda08g00710 210 SUPERFAMILY PriA/YqbF domain 12 71 - -
Bda08g00710 210 PANTHER DNA REPLICATION COMPLEX GINS PROTEIN PSF2 1 199 IPR007257 GO:0005634|GO:0006260
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda08g00710 Bda-Chr8:7876721 Bda09g00575 Bda-Chr9:8036192 3.00E-153 dispersed
Bda06g00222 Bda-Chr6:3792777 Bda08g00710 Bda-Chr8:7876721 2.15E-154 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda08g00710 K10733 - csv:101212053 343.199