Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda08g00768 ACTTTCATTGTTTGTCTGAACTTCGGTACGATAGCAATGGATGCCAAAAACCAGAGTCCCAGCTCAAATTCCTCTCCCACTAAACAAATCTTCATCCTCGCTGGCCAAAGCAACATGGCCGGACGCGGCGGCGCGTCGCAGAAAAATCACCACTGGGACGGCTTCGTACCAGCCGCCTCCCAACCCCACCCTTCCATTCTCCGCCTTAACGTCAAACTCCAGTGGGAGGAAGCTCACGAGCCGCTCCACACCGACATCGACATGAAAAAGGTCTGCGGGGTTGGTCCGGGAATGTCATTCGCCAACGCGGTTAGGGAGAGGATGGGAACGGTGGGGCTGGTTCCTTGCGCCGTCGGGGGAACCGCCATAAAGGAGTGGGCGCGTGGACAGCACTTGTACGAAAACATGGTGAGGAGAGCGAAGAAGAGCGTGGAAGGTGGAGGACAAATCAGAGCCCTGCTGTGGTACCAAGGAGAAAGCGACGCGTTGACGCAACATGATGCTGATGCGTACCAGAGGAACATGGAGCAGCTCATAAACAATGTTAGAAGTGACCTTGGTTTGCCTTATCTCCCCATAATTCAGGTCGCAATTGCTTCAGGGGCTGGAAAATTCGCAGAGACTGTGAGGGAAGCACAAAAGCGGATAAAAATGGAAAATGTGGCGTGCGTCGATGCAAAGGGATTGCCGCTTCAGGAAGACCACCTTCACTTAACTTCGGATGCTCAAGCTCAACTCGGTCATTCTCTGGCCAATGCATTTGTGGCCAATTTCGCCTCTTCAATTGGATCTACCACATCGGTGTGTTTCTTCTTCTTGGCCATCTTATTTTCCTTTGTTTTTTTGGTAGGATTTCATTTTTTATGGAGGCTCTGA 876 51.6 TFIVCLNFGTIAMDAKNQSPSSNSSPTKQIFILAGQSNMAGRGGASQKNHHWDGFVPAASQPHPSILRLNVKLQWEEAHEPLHTDIDMKKVCGVGPGMSFANAVRERMGTVGLVPCAVGGTAIKEWARGQHLYENMVRRAKKSVEGGGQIRALLWYQGESDALTQHDADAYQRNMEQLINNVRSDLGLPYLPIIQVAIASGAGKFAETVREAQKRIKMENVACVDAKGLPLQEDHLHLTSDAQAQLGHSLANAFVANFASSIGSTTSVCFFFLAILFSFVFLVGFHFLWRL 291
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 10007601 10008842 + Bda029270.1 Bda08g00768 11624

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Bda08g00768 291 Pfam Carbohydrate esterase, sialic acid-specific acetylesterase 28 255 IPR005181 -
Bda08g00768 291 SUPERFAMILY SGNH hydrolase 29 256 - -
Bda08g00768 291 Gene3D SGNH hydrolase 27 259 IPR036514 -
Bda08g00768 291 PANTHER BNACNNG62850D PROTEIN 24 258 - -
Bda08g00768 291 PANTHER ESTERASE, PUTATIVE (DUF303)-RELATED 24 258 - -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda08g00768 - - - qsu:112035958 350.517
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda03g00197 Bda-Chr3:1583523 Bda08g00768 Bda-Chr8:10007601 3.45E-82 dispersed
Bda08g00768 Bda-Chr8:10007601 Bda08g00807 Bda-Chr8:11353710 0 dispersed
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi3g619 Blo02g00841 . . Bda08g00768 . . Bma05g00526 . Cmo19g00597 . . . . . . . Cpe15g00469 . . . . . . . Cla02g00633 Cam02g0666 . . Clacu02g0674 Cmu02g0668 . Cone12ag1073 . . . Lsi03g00529 . . . . . . . . . . . . . . . Cma19g00581 . Car19g00443 . . . . . . . . . . . . . . . . . . . .
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0009277 2 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 2 3 34
       

Transcriptome

Select Gene Chr Type da1 da2 da3 da4 da5 da6 da7 da8 da9 da10
Bda08g00768 Bda_Chr08 FPKM 3.261316 3.128816 5.767908 5.574726 4.846998 5.699925 3.99727 7.93497 8.655645