Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda08g00785 TTTGCAGGCTGCCCTTTGGATTTGATTCCATCAAATTTTACTCTAGTGGTCTCTATGTGCAAAAATAATGGTGACAGAGGAAAGTGCTGTCGCTATATTAATGCCGTTATTGCAGTTTCTGTTGCTCATTATGCAAATGAAACAAACAATCTTGGGGTTCCTTCTGATTTTTCCGAATCCTGCCTTGAGTCTATTTTGCACACCATGGTGCTATATGGAGTTCCACAAAACGCGACAGCATTTTGTGGATTTGGAACGAAGATTTCAGTCAACTACGAGTGCAAGGGACGAACAACTGTCACGCAAATGCTGCAATCTGCAGAGTTTCCCGATGTTATTGACAATTGCAAAATGCCGTTGTCCGAAGACACCAAGTGTAGAACGTGTATAAATTCTTCCATGGTTTTCCTTCGTCATATTGTTGGAATTAATGATAACATAACGTTGAGTACATGTCGTGATGCCACGTTTGTCTCGCTTGTTAGTCAAGTAGATCCTGATTCAGCTGCTGAGTTTGCCAACTGTTTCTTTGGAGTTCAAGGGCTAAACATGCATACAGAGCCGTCCCCGAATTTGGTGACCCCAGATGTTTCTCCAAGTCCTTTTGATGCTGCAAGCCCAAGCCAACAATTGTTAGGCATACCCATTTCCCAGAAGCACCATTCCTACCATCTAACTCTAGTCCCTGGCATCGGCATTGGAGTTACAGCCTTTTCTGTTCTGATGCTGCTGGTCTTGATCGTGCTGGTACGTAGGAAATGCAGACAATTAGATGATTCTGAGAATGCAGATTTCACATCGTCAAAAACCTTCTCTGTTCCTCGAACAGTCCGAAAAATTCAAGAAGGTAATTTTATGTTTCAAAAGTTCAGCTACAAGGACATAAAGAAAGCTACAGACGATTTTAGAAATGAAATTAGACGTGGAGGATTTGGGACTACATACAAGGCTCAGTTTGAGAATGGTTTAGTGGCAGCAGTGAAGAGGATAAACAAAGTGTTGGGGCAGAGGGAAAAGGACTTCTGTAGAGAGATTGAGCTTCTTGCTAGATTACATCATCGTCACCTTGTTGCTCTAAGAGGCTTTTCCATCGGAAAACATGAGAGGTTTCTCATTTATGAGTACATGGCAAATGGAAGCTTGACTGATCATCTTCACTCGATCAGTACAAATCCATTAAGTTGGCAGACGAGAATACAAATCGCCATAGACGTGGCCAATGCTCTGGAGTACCTGCATTTTTATTGCGATCCTCCTCTGTGCCATAGAGACATCAAGTCCAGTAACATCTTACTTGATGAATATTTTGTTGCCAAGATTGCAGATTTTGGCCTTGCTCATGTTTCAAAAGATGGTTCTGTTTGCTTTGAACCAGTAAATACTGATGTCCAGGGAACAGCTGGTTACATTGATCCTGAGTATGTTGTCACTCAAGAACTTACCGAGAAAAGTGATGTATACAGCTATGGCGTTCTACTCTTGGAGATAGTCACCGGAAGACTACCTATACTAGACGGCAAAAGTTTGGTAGAATGGTCACACTTTTACATGCAATCGGAAACAACTCTACCCGAACTAGTGGATCCGAGAATCAAGGATTCCTTCGACTTAGAACAGCTTCATGCAGTTGTTTCGATAGTAAAATTGTGTACGCATCGAGAAGGAAGGGACAGGCCATCGATTAAGCAGGTCATTCGGCTTTTGTACGATAGTTCAGATCCAATGCAAAGTGGGTTTATCGACATAATGGACTATGAAGACTATGAGCATGTGGAAAGAAGAGAGAGAACTAGTAGAGGAAAAATGCATAGTGGAGATATAAGATGCCTCGCTTCGTCTTCTAGTACTTCAAGATCTCATTGTAGTAGAAGCTTTCTGCTTGAAACCAGCTCTTCTCATTCCCCTTCCTAA 1911 42.02 FAGCPLDLIPSNFTLVVSMCKNNGDRGKCCRYINAVIAVSVAHYANETNNLGVPSDFSESCLESILHTMVLYGVPQNATAFCGFGTKISVNYECKGRTTVTQMLQSAEFPDVIDNCKMPLSEDTKCRTCINSSMVFLRHIVGINDNITLSTCRDATFVSLVSQVDPDSAAEFANCFFGVQGLNMHTEPSPNLVTPDVSPSPFDAASPSQQLLGIPISQKHHSYHLTLVPGIGIGVTAFSVLMLLVLIVLVRRKCRQLDDSENADFTSSKTFSVPRTVRKIQEGNFMFQKFSYKDIKKATDDFRNEIRRGGFGTTYKAQFENGLVAAVKRINKVLGQREKDFCREIELLARLHHRHLVALRGFSIGKHERFLIYEYMANGSLTDHLHSISTNPLSWQTRIQIAIDVANALEYLHFYCDPPLCHRDIKSSNILLDEYFVAKIADFGLAHVSKDGSVCFEPVNTDVQGTAGYIDPEYVVTQELTEKSDVYSYGVLLLEIVTGRLPILDGKSLVEWSHFYMQSETTLPELVDPRIKDSFDLEQLHAVVSIVKLCTHREGRDRPSIKQVIRLLYDSSDPMQSGFIDIMDYEDYEHVERRERTSRGKMHSGDIRCLASSSSTSRSHCSRSFLLETSSSHSPS 636
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 10639976 10643200 + Bda029298.1 Bda08g00785 11641
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda08g00785 636 PANTHER BNAC06G02630D PROTEIN 2 636 - -
Bda08g00785 636 CDD STKc_IRAK 306 568 - -
Bda08g00785 636 Gene3D Phosphorylase Kinase; domain 1 264 375 - -
Bda08g00785 636 PANTHER OS01G0750732 PROTEIN 2 636 - -
Bda08g00785 636 Pfam SPARK 3 146 IPR043891 -
Bda08g00785 636 Gene3D Transferase(Phosphotransferase) domain 1 376 582 - -
Bda08g00785 636 Pfam Protein kinase domain 305 566 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bda08g00785 636 SMART serkin_6 300 575 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bda08g00785 636 SUPERFAMILY Protein kinase-like (PK-like) 282 569 IPR011009 -
Bda08g00785 636 ProSiteProfiles Protein kinase domain profile. 300 580 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bda08g00785 636 ProSitePatterns Serine/Threonine protein kinases active-site signature. 420 432 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda08g00785 Bda-Chr8:10639976 Bda08g00923 Bda-Chr8:16984613 1.92E-69 dispersed
Bda07g00707 Bda-Chr7:8342150 Bda08g00785 Bda-Chr8:10639976 2.92E-53 transposed
Bda08g00833 Bda-Chr8:13123351 Bda08g00785 Bda-Chr8:10639976 0 transposed
Bda08g00785 Bda-Chr8:10639976 Bda08g00884 Bda-Chr8:15954932 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
69768 PF00069 Pkinase 2.50E-44 CL0016 Bda PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda08g00785 - - jcu:105639495 878.626