Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda08g00833 ATGTGCAAAAATAATGGTGACAAAGGAAAGTGCTGTCGCTATATTAATGCCGTTATTGCAGTTTCTGTTGCTCATTATGCAAATGAAACAAACAATCTTGGGGTTCCTTCTGATTTTTCTGAATCCTGCCTTGAGTCTATTTTGCACACCATGGTGCTATATGGAGTTCCACAAAACGCGACAGCATTTTGTGGATTTGGAACGAAGATTTCAGTCAACTACGAGTGCATGGGACGAACAACTGTCACGCAAATGCTGCAATCTGCAGATTTTCCCGATGTTATTGACAATTGCAAAATGCCGTTGTTTGAAGACACCAAGTGTAGAACGTGTATAAATTCTTCCATGGTTTTCCTTCGTCATATTGTTGGAATTGATGATAACATAACGTTGAGTACATGTCGTGATGCCATGTTTGTCTGGCTTGTTAGTCAAGTAGATCCTGATTCAGCTGCTGAGTTTGCCAACTGTTTCTTTGGAGTTCAAGGGCTAAACATGCATACAGAGCCGTCCCCGAATTTGGTGACCCCAGACATTTCTCCAAGTCCTTTTGATGCTGCAAGCCCAAGCCAACAATTGTTAGGCATACCCATTTCCCAGAAGCACCATTCCTACCATCTAACTCTAGTCCCAGGCATCGCCATTGCAGTTACAGCCTTTTCTGTTCTGATGCTGCTGGCCTTGATTGTGCTGGTACGTAGGAAATGCAGACAATTAGATGATTCTGAGAATGCAGATTTCACATCGTCAAAAACCTTCTCTGTTCCTCGAACTGTCCGAAAAATTCAAGACGGTAATTTTATGTTTCAAAAGTTCAGCTACAAGGACATAAAGAAAGCTACAGACGATTTTAGAGATGAAATTAGTCGTGGAGGATTTGGGACTACATACAAGGCTCAGTTTGAGAATGGTTTAGTGGCAGCATTGAAGAGGATAAACAAAGTGTTGGGGCAGAGGGAAAAGGACTTCTGTAGAGAGATAGAGCTTCTTGCTAGATTACATCATCGTCACTTTGTTGCTCTAAGAGGCTTTTCCATCGGAAAACATGAGAGGTTTCTCATTTATGAGTACATGGCAAATGGAAGCTTGACTGATCATCTTCACTCGAACAGTACAAATCCATTAAGTTGGCAGACGAGAATACAAATCGCCATAGACGTGGCGAATGCTCTGCTAAATGAGTACCTGCATTTTTATTGCGATCCTCCGCTGTGCCATAGAGACATCAAGTCCAGTAACATCTTACTTGATGAATATTTTGTTGCCAAGGTTGCAGATTTTGGCCTTGCTCATGCTTCAAAAGATGGTTTTGTTTGCTTTGAATCAGTAAATACTGATGTCCAGGGAACAGCTGGTTACATTGATCCTGAGTATGTTGTCACTCAAGAACTTACCGAGAAAAGTGATGTATACAGCTATGACGTTCTACTCTTGGAGATAGTCACAGGAAGACTAGCTATACTAGACGGCAAAAGTTTGGTAGAATGGTCACACTTTTACATGCAGTCGGAATCAACTCTACCCAATCTAGTGGATCCGAGAATCAAGGATCCCTTCGACTTGGAACAGCTTCACGCAGTTGTTAGAACTAGTAGAGGAAAAATGCATAATGGAGATATAAGATGCCTCGCTTCGTCTTCTAGTACTTCAAGATCTCATTGTAGTAGAAGCTTTCTGCTTGAAACCAGCTCTTCTCATTCCCCTTCTTAA 1710 41.64 MCKNNGDKGKCCRYINAVIAVSVAHYANETNNLGVPSDFSESCLESILHTMVLYGVPQNATAFCGFGTKISVNYECMGRTTVTQMLQSADFPDVIDNCKMPLFEDTKCRTCINSSMVFLRHIVGIDDNITLSTCRDAMFVWLVSQVDPDSAAEFANCFFGVQGLNMHTEPSPNLVTPDISPSPFDAASPSQQLLGIPISQKHHSYHLTLVPGIAIAVTAFSVLMLLALIVLVRRKCRQLDDSENADFTSSKTFSVPRTVRKIQDGNFMFQKFSYKDIKKATDDFRDEISRGGFGTTYKAQFENGLVAALKRINKVLGQREKDFCREIELLARLHHRHFVALRGFSIGKHERFLIYEYMANGSLTDHLHSNSTNPLSWQTRIQIAIDVANALLNEYLHFYCDPPLCHRDIKSSNILLDEYFVAKVADFGLAHASKDGFVCFESVNTDVQGTAGYIDPEYVVTQELTEKSDVYSYDVLLLEIVTGRLAILDGKSLVEWSHFYMQSESTLPNLVDPRIKDPFDLEQLHAVVRTSRGKMHNGDIRCLASSSSTSRSHCSRSFLLETSSSHSPS 569
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 13123351 13130531 - Bda029390.1 Bda08g00833 11689
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda08g00833 569 SMART serkin_6 282 528 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bda08g00833 569 PANTHER BNAC06G02630D PROTEIN 3 529 - -
Bda08g00833 569 PANTHER BNAC06G02630D PROTEIN 534 569 - -
Bda08g00833 569 Gene3D Phosphorylase Kinase; domain 1 247 357 - -
Bda08g00833 569 SUPERFAMILY Protein kinase-like (PK-like) 266 513 IPR011009 -
Bda08g00833 569 Pfam SPARK 2 128 IPR043891 -
Bda08g00833 569 ProSitePatterns Serine/Threonine protein kinases active-site signature. 404 416 IPR008271 GO:0004672|GO:0006468
Bda08g00833 569 ProSiteProfiles Protein kinase domain profile. 282 569 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bda08g00833 569 Gene3D Transferase(Phosphotransferase) domain 1 358 540 - -
Bda08g00833 569 PANTHER OS01G0750732 PROTEIN 3 529 - -
Bda08g00833 569 PANTHER OS01G0750732 PROTEIN 534 569 - -
Bda08g00833 569 Pfam Protein tyrosine and serine/threonine kinase 285 483 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda08g00833 Bda-Chr8:13123351 Bda08g00884 Bda-Chr8:15954932 0 dispersed
Bda08g00833 Bda-Chr8:13123351 Bda08g00785 Bda-Chr8:10639976 0 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
69770 PF07714 PK_Tyr_Ser-Thr 1.10E-35 CL0016 Bda PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda08g00833 - - jcu:105639495 763.451