Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Bda08g00880 | ATGGCGGCCAACGTAGAAGAGCAGAAAATCCAAGGCGGAAGGCACCAGGAGGTCGGCCACAAGAGTCTTTTGCAGAGCGATGCTCTCTACCAGGTGAATCTATATTTCTCTCTCTTCTGTTTGCAGTATATTTTAGAGACTAGCGTGTACCCAAGAGAGCCTGAATCCATGAAAGAACTCAGAGAAGTAACAGCCAAACATCCATGGAATCTCATGACAACTTCAGCAGATGAAGGGCAGTTTCTGCACATGCTTCTGAAGCTCATCAATGCCAAGAACACGATGGAGATTGGCGTTTTCACTGGCTACTCTCTTCTGGCGACGGCCATTGCCATTCCTGACGATGGAAAGATCTTGGCGATGGACATTAATAGAGAAAACTACGAGATCGGTCTTCCAATCATAGAAAAAGCTGGCGTTGCCCACAAAATCGACTTCAGAGAAGGCCCTGCTCTTCCAGTTCTTGATCTCCTCCTCGAAGACAGTAAGAATCATGGAAGCTACGATTTCATCTTCGTGGACGCTGATAAGGACAACTACATCAACTACCACAAAAGACTGATCGATCTGGTTAAGGTAGGGGGTATAATCGGGTACGACAACACTCTGTGGAACGGTTCAGTGGTGGCCCCTCCCGATGCGCCATTGAGAAAGTATGTTAGGTACTACAGAGACTTTGTGCTGGAGCTCAACAAGGCCCTCGCTGTGAACCCCAGGATTGAAATCTGCATGCTCCCCGTCGGTGATGGGATCACTCTCTGCCGTCGGATCAAGTGA | 777 | 48.39 | MAANVEEQKIQGGRHQEVGHKSLLQSDALYQVNLYFSLFCLQYILETSVYPREPESMKELREVTAKHPWNLMTTSADEGQFLHMLLKLINAKNTMEIGVFTGYSLLATAIAIPDDGKILAMDINRENYEIGLPIIEKAGVAHKIDFREGPALPVLDLLLEDSKNHGSYDFIFVDADKDNYINYHKRLIDLVKVGGIIGYDNTLWNGSVVAPPDAPLRKYVRYYRDFVLELNKALAVNPRIEICMLPVGDGITLCRRIK | 258 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 8 | 15873772 | 15874818 | - | Bda029484.1 | Bda08g00880 | 11736 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Bda08g00880 | 258 | Pfam | O-methyltransferase | 46 | 257 | IPR002935 | GO:0008171 | |
| Bda08g00880 | 258 | PANTHER | O-METHYLTRANSFERASE-RELATED | 1 | 258 | - | - | |
| Bda08g00880 | 258 | SUPERFAMILY | S-adenosyl-L-methionine-dependent methyltransferases | 41 | 256 | IPR029063 | - | |
| Bda08g00880 | 258 | PANTHER | CAFFEOYL-COA O-METHYLTRANSFERASE 1 | 1 | 258 | - | - | |
| Bda08g00880 | 258 | ProSiteProfiles | SAM-dependent O-methyltransferase class I-type profile. | 33 | 257 | IPR002935 | GO:0008171 | |
| Bda08g00880 | 258 | Gene3D | Vaccinia Virus protein VP39 | 38 | 258 | IPR029063 | - | |
| Bda08g00880 | 258 | CDD | AdoMet_MTases | 99 | 197 | - | - |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Bda08g00880 | Bda-Chr8:15873772 | Bda15g00038 | Bda-Chr15:1844295 | 4.84E-12 | dispersed | |
| Bda05g00798 | Bda-Chr5:56439697 | Bda08g00880 | Bda-Chr8:15873772 | 7.51E-43 | transposed | |
| Bda14g00513 | Bda-Chr14:3727678 | Bda08g00880 | Bda-Chr8:15873772 | 1.28E-114 | wgd | |
| Bda08g00783 | Bda-Chr8:10557312 | Bda08g00880 | Bda-Chr8:15873772 | 0 | wgd |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Bda08g00880 | K00588 | - | cit:102619432 | 457.603 |