Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda08g00923 ATGGCTTCTTCGCCAGAATCTCCACCATCTCCGCCTTCAGATTCTTCTCCTTCCCCACCGCAGCCTCCAGCTGAATTATCGCCACCTCCGGTGGAAGCGTCACCTCCTCCACCAGATCTTTCTCCCCCTCCGGAGGAGACAACCCCTCCCTCACTATCTCCACCTCCACCTGAATCTGAGTCTCCTCCACCTCCAAACGAATCATCGACCCCATCGACACCACCAGCATCACCATCACCATCGCCACCACCTCCTAAGAGCTCAACTAATACACCGTTGTCCCCTCCACCGCCATCGCCACAAGGGACATCCACGCCATCACCCCCTCCACCACCTCCTCCTCCTCCGCCAACATCATCGTCGAAGAATGCATCGCCACCACCTCCACACAAATCTCTCTCGGGGTCGTCAATATCCAGCTCTTCTTCAAGTGATAGTTCATCGTCCCAAAAGTTGCCTATCATAATAGGAGTGGCTGCAGGAGCAGGTTTATTGCTTCTCATCGTGGCTTTGTTCTTCCTCTCATACTGCAGAAAGAAGAAGAAACGTAGAGATCAAATGTATTACAGAGATCAGTCTCGGGGCAAAAAGGGAGGTGAATACTACAATGGTTATGGACAAAATCAGATTCCCAATCTTAAACCTCCACCTGGCGCTGTTTTCGGAGAATGGACGCCACCAGCACCACCGCCTCCGCCGCCCCATCTAAGCAGTGACTTGAGCTCCAATTTCTCAGGCTCAGGCTCACAAGGACCGCCCTTGCCTCCTCCGCACCCAACTGTGGCACTTGGCTTCAACAAGAGCACCTTCACTTACGATGAGCTAGTGTCTGCAACAGGAGGGTTCTCAGTGGCCAACCTCTTGGGTCAAGGTGGCTTTGGCTATGTCCACAAAGGTGTCCTTCCAAATGGAAAGGAAATTGCAGTGAAGAGTCTCAAGTTGGGAAGTGGTCAAGGCGAGCGGGAATTCCAGGCTGAGGTCGAGATTATTAGCCGCGTTCATCATCGACACCTTGTCTCCCTCGTCGGGTATTGCATTGCCGGTGGAAGAAAGATGTTGGTCTATGAATTTGTTCCCAATAATAACCTTGAATTCCACCTTCACGGGAAGGATCGCCCTCCAATGGATTGGGCTACTAGAGTCAAGATTGCTTTAGGGTCTGCTAAAGGCCTTGCCTACCTGCACGAAGACTGTCACCCGCGCATCATTCATCGAGACATAAAATCTGCAAATATTCTTATCGATTACAGTTTTGAAGCCAAGGTGGCTGATTTCGGATTGGCGAAGCTAAATCAAGACAACAGCACTCACGTATCGACTCGTGTCATGGGGACTTTCGGATACTTGGCTCCTGAATATGCATCAAGCGGAAAGCTAACTGAGAAATCTGATGTTTTCTCATACGGTGTTATGCTCTTAGAACTGATAACCGGAAGGCGCCCGGTGGACCTCACTGGTGTCATGGAGGACAGCTTAGTAGACTGGGCAAGGCCTATTTGTGCTCAGGCAATGACTGAAGGAGACTTCCACGAGTTGGTCGATCCGCGATTGGAACAAAACTTTATGCATCACGAAATGGCACAAATGGTCGCCTGCGCTGGGGCTTGCGTCCGACATTCTGCAAGGAGGCGCCCGAAAATGAGCCAGATTGTGAGGGCACTGGAAGGTGATGTTTCGCTCGAAGATCTAAACGAGGGGGTGAAAACAGGCCAGAGTTCATACTTCAGCTCAAGCACATCAGATTATGATGGAGGCTCGTACAGCAAAGACATGAAGAAGTTCAAGAACGTGGCATTGAACAGCAATGAATACACGAGCAGCGAGTATGGAATGACGAGCGAATACGGGCTCAACCCGTCGTCTTCGAGCAGCGACTCCCAAGAAATGAGCATCAAAGGAAGCCGCCCAAACAGTCCTTGA 1920 51.04 MASSPESPPSPPSDSSPSPPQPPAELSPPPVEASPPPPDLSPPPEETTPPSLSPPPPESESPPPPNESSTPSTPPASPSPSPPPPKSSTNTPLSPPPPSPQGTSTPSPPPPPPPPPPTSSSKNASPPPPHKSLSGSSISSSSSSDSSSSQKLPIIIGVAAGAGLLLLIVALFFLSYCRKKKKRRDQMYYRDQSRGKKGGEYYNGYGQNQIPNLKPPPGAVFGEWTPPAPPPPPPHLSSDLSSNFSGSGSQGPPLPPPHPTVALGFNKSTFTYDELVSATGGFSVANLLGQGGFGYVHKGVLPNGKEIAVKSLKLGSGQGEREFQAEVEIISRVHHRHLVSLVGYCIAGGRKMLVYEFVPNNNLEFHLHGKDRPPMDWATRVKIALGSAKGLAYLHEDCHPRIIHRDIKSANILIDYSFEAKVADFGLAKLNQDNSTHVSTRVMGTFGYLAPEYASSGKLTEKSDVFSYGVMLLELITGRRPVDLTGVMEDSLVDWARPICAQAMTEGDFHELVDPRLEQNFMHHEMAQMVACAGACVRHSARRRPKMSQIVRALEGDVSLEDLNEGVKTGQSSYFSSSTSDYDGGSYSKDMKKFKNVALNSNEYTSSEYGMTSEYGLNPSSSSSDSQEMSIKGSRPNSP 639
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 16984613 16987258 - Bda029555.1 Bda08g00923 11779
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda08g00923 639 MobiDBLite consensus disorder prediction 125 149 - -
Bda08g00923 639 ProSiteProfiles Protein kinase domain profile. 282 560 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bda08g00923 639 SMART serkin_6 282 527 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bda08g00923 639 PANTHER PROLINE-RICH RECEPTOR-LIKE PROTEIN KINASE PERK4 9 614 - -
Bda08g00923 639 Gene3D Transferase(Phosphotransferase) domain 1 358 572 - -
Bda08g00923 639 MobiDBLite consensus disorder prediction 183 260 - -
Bda08g00923 639 MobiDBLite consensus disorder prediction 608 639 - -
Bda08g00923 639 ProSitePatterns Protein kinases ATP-binding region signature. 288 310 IPR017441 GO:0005524
Bda08g00923 639 MobiDBLite consensus disorder prediction 1 149 - -
Bda08g00923 639 PANTHER PROLINE-RICH RECEPTOR-LIKE PROTEIN KINASE PERK5 9 614 - -
Bda08g00923 639 MobiDBLite consensus disorder prediction 1 124 - -
Bda08g00923 639 MobiDBLite consensus disorder prediction 220 237 - -
Bda08g00923 639 SUPERFAMILY Protein kinase-like (PK-like) 258 554 IPR011009 -
Bda08g00923 639 Pfam Protein tyrosine and serine/threonine kinase 285 554 IPR001245 GO:0004672|GO:0006468
Bda08g00923 639 ProSitePatterns Serine/Threonine protein kinases active-site signature. 402 414 IPR008271 GO:0004672|GO:0006468
Bda08g00923 639 Gene3D Phosphorylase Kinase; domain 1 259 357 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda04g00055 Bda-Chr4:890864 Bda08g00923 Bda-Chr8:16984613 0 dispersed
Bda08g00785 Bda-Chr8:10639976 Bda08g00923 Bda-Chr8:16984613 1.92E-69 dispersed
Bda08g00923 Bda-Chr8:16984613 Bda10g00129 Bda-Chr10:3557155 0 dispersed
Bda11g01113 Bda-Chr11:11007129 Bda08g00923 Bda-Chr8:16984613 0 dispersed
Bda08g00884 Bda-Chr8:15954932 Bda08g00923 Bda-Chr8:16984613 7.81E-68 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
69773 PF07714 PK_Tyr_Ser-Thr 4.70E-48 CL0016 Bda PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda08g00923 - - jre:109003295 648.277