Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda08g00984 ATGTTATCAGTTTTGATGAACTTTTTAAGGGCCTGCTTTTTTCCGGCATCGGATCAACGGGTCAAGGGATCGGATTCCGGAGGGCGGCAGGATGGCCTCCTCTGGTACAAAGACGGTGGGCAACACTTGAATGGTGATTTTTCAATGGCTGTTGTTCAGGCCAATAACATACTTGAGGACCAGAGTCAGATTGAATCTGGCTGTTTGAGTTCTAACGAATTTGGCCTTTTTGGTACTTTCGTTGGCGTTTACGATGGGCATGGTGGTCCCGAGACTTCCCGCTATATCACTGATCACCTCTTTCGACATCTCAAGAGATTTGCTTCAGAGCAGAAAACAATGTCTGTCGATGTAATAAGGAAGGCATTCCAAGCTACGGAAGATGGGTTCACTTCCTTAGTCTCGAAACAGTGGCCGATGAAGCCGCAAATTGCAGCCGTTGGATCGTGTTGCCTAGTAGGAATCGTGTGTACTGGGAATCTCTACGTTGCCAACTTAGGCGATTCACGGGCTGTTTTAGGAAGATTAGTGAAAGCATCAGGGGAAGTTCTAGCGATACAGGTATCGGCAGAGCATAATGCTGCCATTGAGTCTGTAAGACAGGAGCTTCGTGCTGCACATCCCCATGACCCGAACATTGTTCTTCTGAAGCATAATGTATGGCGAGTTAAGGGTCTTATACAGATCTCTCGATCTATTGGCGATGTGTATCTGAAGAAAGCTGAGTTCAACAGGGAGCCTCTTTATGCTAAGTTTCGCCTCCGTGAACCTTTCAAGAGTCCGATTTTGAGCTCAGAACCATCTATTTCAGTGCTCCAATTGCAGCCTTGTGATCAATTTATCATATTTGCATCGGACGGTCTGTGGGAACAGCTCAGCAATCAGGAGGCTGTGGACATAGTGAAAAATCATTCACGCAGTGTAAGATTTCTCTCTCGACTATTCTTATCGAGTTCTATAGTTATCATACTGGGGAGTGAAAGTATCTCCTGTATCCATTTCTTCCTCAGGCTTTCTTGGAAAAACACACTTTGTCCATGA 1041 45.63 MLSVLMNFLRACFFPASDQRVKGSDSGGRQDGLLWYKDGGQHLNGDFSMAVVQANNILEDQSQIESGCLSSNEFGLFGTFVGVYDGHGGPETSRYITDHLFRHLKRFASEQKTMSVDVIRKAFQATEDGFTSLVSKQWPMKPQIAAVGSCCLVGIVCTGNLYVANLGDSRAVLGRLVKASGEVLAIQVSAEHNAAIESVRQELRAAHPHDPNIVLLKHNVWRVKGLIQISRSIGDVYLKKAEFNREPLYAKFRLREPFKSPILSSEPSISVLQLQPCDQFIIFASDGLWEQLSNQEAVDIVKNHSRSVRFLSRLFLSSSIVIILGSESISCIHFFLRLSWKNTLCP 346
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 19880455 19881655 - Bda029658.1 Bda08g00984 11840
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda08g00984 346 Pfam Protein phosphatase 2C 79 307 IPR001932 -
Bda08g00984 346 ProSiteProfiles PPM-type phosphatase domain profile. 46 346 IPR001932 -
Bda08g00984 346 CDD PP2Cc 47 307 IPR001932 -
Bda08g00984 346 SMART PP2C_4 40 325 IPR001932 -
Bda08g00984 346 ProSitePatterns PPM-type phosphatase domain signature. 80 88 IPR000222 GO:0043169
Bda08g00984 346 SUPERFAMILY PP2C-like 55 305 IPR036457 -
Bda08g00984 346 Gene3D - 36 320 IPR036457 -
Bda08g00984 346 PANTHER PROTEIN PHOSPHATASE 2C FAMILY PROTEIN 5 307 - -
Bda08g00984 346 PANTHER ALPHABET, ISOFORM E-RELATED 5 307 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bda08g00984 Bda14g00624 CCT
Bda08g00984 Bda15g01025 CCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda08g00984 Bda-Chr8:19880455 Bda14g00960 Bda-Chr14:7730172 5.40E-180 dispersed
Bda15g01025 Bda-Chr15:19217571 Bda08g00984 Bda-Chr8:19880455 1.56E-109 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda08g00984 - - tcc:18607514 515.383