Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Bda08g00984 | ATGTTATCAGTTTTGATGAACTTTTTAAGGGCCTGCTTTTTTCCGGCATCGGATCAACGGGTCAAGGGATCGGATTCCGGAGGGCGGCAGGATGGCCTCCTCTGGTACAAAGACGGTGGGCAACACTTGAATGGTGATTTTTCAATGGCTGTTGTTCAGGCCAATAACATACTTGAGGACCAGAGTCAGATTGAATCTGGCTGTTTGAGTTCTAACGAATTTGGCCTTTTTGGTACTTTCGTTGGCGTTTACGATGGGCATGGTGGTCCCGAGACTTCCCGCTATATCACTGATCACCTCTTTCGACATCTCAAGAGATTTGCTTCAGAGCAGAAAACAATGTCTGTCGATGTAATAAGGAAGGCATTCCAAGCTACGGAAGATGGGTTCACTTCCTTAGTCTCGAAACAGTGGCCGATGAAGCCGCAAATTGCAGCCGTTGGATCGTGTTGCCTAGTAGGAATCGTGTGTACTGGGAATCTCTACGTTGCCAACTTAGGCGATTCACGGGCTGTTTTAGGAAGATTAGTGAAAGCATCAGGGGAAGTTCTAGCGATACAGGTATCGGCAGAGCATAATGCTGCCATTGAGTCTGTAAGACAGGAGCTTCGTGCTGCACATCCCCATGACCCGAACATTGTTCTTCTGAAGCATAATGTATGGCGAGTTAAGGGTCTTATACAGATCTCTCGATCTATTGGCGATGTGTATCTGAAGAAAGCTGAGTTCAACAGGGAGCCTCTTTATGCTAAGTTTCGCCTCCGTGAACCTTTCAAGAGTCCGATTTTGAGCTCAGAACCATCTATTTCAGTGCTCCAATTGCAGCCTTGTGATCAATTTATCATATTTGCATCGGACGGTCTGTGGGAACAGCTCAGCAATCAGGAGGCTGTGGACATAGTGAAAAATCATTCACGCAGTGTAAGATTTCTCTCTCGACTATTCTTATCGAGTTCTATAGTTATCATACTGGGGAGTGAAAGTATCTCCTGTATCCATTTCTTCCTCAGGCTTTCTTGGAAAAACACACTTTGTCCATGA | 1041 | 45.63 | MLSVLMNFLRACFFPASDQRVKGSDSGGRQDGLLWYKDGGQHLNGDFSMAVVQANNILEDQSQIESGCLSSNEFGLFGTFVGVYDGHGGPETSRYITDHLFRHLKRFASEQKTMSVDVIRKAFQATEDGFTSLVSKQWPMKPQIAAVGSCCLVGIVCTGNLYVANLGDSRAVLGRLVKASGEVLAIQVSAEHNAAIESVRQELRAAHPHDPNIVLLKHNVWRVKGLIQISRSIGDVYLKKAEFNREPLYAKFRLREPFKSPILSSEPSISVLQLQPCDQFIIFASDGLWEQLSNQEAVDIVKNHSRSVRFLSRLFLSSSIVIILGSESISCIHFFLRLSWKNTLCP | 346 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
8 | 19880455 | 19881655 | - | Bda029658.1 | Bda08g00984 | 11840 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Bda08g00984 | 346 | Pfam | Protein phosphatase 2C | 79 | 307 | IPR001932 | - | |
Bda08g00984 | 346 | ProSiteProfiles | PPM-type phosphatase domain profile. | 46 | 346 | IPR001932 | - | |
Bda08g00984 | 346 | CDD | PP2Cc | 47 | 307 | IPR001932 | - | |
Bda08g00984 | 346 | SMART | PP2C_4 | 40 | 325 | IPR001932 | - | |
Bda08g00984 | 346 | ProSitePatterns | PPM-type phosphatase domain signature. | 80 | 88 | IPR000222 | GO:0043169 | |
Bda08g00984 | 346 | SUPERFAMILY | PP2C-like | 55 | 305 | IPR036457 | - | |
Bda08g00984 | 346 | Gene3D | - | 36 | 320 | IPR036457 | - | |
Bda08g00984 | 346 | PANTHER | PROTEIN PHOSPHATASE 2C FAMILY PROTEIN | 5 | 307 | - | - | |
Bda08g00984 | 346 | PANTHER | ALPHABET, ISOFORM E-RELATED | 5 | 307 | - | - |
Event-related genes

Select | Gene_1 | Gene_2 | Event_name |
---|---|---|---|
Bda08g00984 | Bda14g00624 | CCT | |
Bda08g00984 | Bda15g01025 | CCT |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Bda08g00984 | Bda-Chr8:19880455 | Bda14g00960 | Bda-Chr14:7730172 | 5.40E-180 | dispersed | |
Bda15g01025 | Bda-Chr15:19217571 | Bda08g00984 | Bda-Chr8:19880455 | 1.56E-109 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Bda08g00984 | - | - | tcc:18607514 | 515.383 |