Cucurbitales platform

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Bda08g01022	ATGAATGATCGCACACATACTGAACCTGGTTATTCTGAGTTTGTGGAAGTCGATCCGACTGGAAGATATGGCAGATACGATGAAATCCTAGGAAAAGGATCTTCCAAGACAGTTTATAGAGCATTTGATGAGTACGAAGGAATTGAAGTTGCTTGGAACCAGATCAAACTCTATGATTTTCTGCAATGCCCAGAAGATCTTGAAAGACTGTACAGTGAAATTCATCTTCTAAAAACATTGAAACACAAAAATATTATGAAACTCTACGCTTCCTGGGTCGATACTTCAAATAGGAACATCAATTTTGTCACTGAAATGTTCACTTCTGGAACACTAAGACAATACAGGCTGAAGCACAGGAGAGTTAACATTAGAGCAGTGAAGCATTGGTGTAGACAGATCTTGAAAGGGCTTGTCTATCTTCATAGCCATGACCCACCTGTGATTCACAGAGATCTCAAGTGTGATAATATTTTTGTAAATGGAAATCAAGGAGAAGTGAAGATTGGTGATCTCGGCCTCGCTGCAATTCGCCGTAAATCGCACGAAGATCATTGTGTTGGGACTCCGGAATTTATGGCTCCAGAAGTTTATGAAGAGGCATACAATGAATTAGTTGACATCTATTCATTTGGAATGTGCTTATTGGAGATGGTTACATTTGAGTATCCATATAGTGAATGTACTCATCCTGCTCAGATTTACAAGAAAGTTACTTCTGGGAAAAAACCGGATGCCTTCTACAAAGTGAATGATCCAGAAGTAAAGCAATTTGTCGAGAAATGTTTGGCGACTTTGTCGCTTAGGCTATCTGCTAGGGAGCTCTTGAATGACAGTTTTCTCCGAATCAAGGACCGTGAATATGATTTGAGACTGTTGGATTGTGGTTCGAGGGATGAGGGTCATCTGATAAGACAGCCTTTCTTTGATCTAAATGGTGGTAAAAGCACTGTTTGTAGCGGAGGATCTGATGATTATAATTATTTTGATGCTTCAAGTAAATGGGGGTATCCTTCTGTTGAGGTTGAACGTAGTGGAATCGAGCTTTTTGAGCGTCGGGATGATGGACATTATGAAGAAGTTGACATAAGTATTACCGGCAAGAGGAGAGAAAATGGCGAAATCTTTCTAAGGCTCAGAATTTCGGATAAAGATGGCGTGATTCGGAACATTTATTTCCCCTTTGATACCAAGATCGATACGGCATTAAGCGTAGCGACTGAAATGGTAGCAGAACTTGATATAATGGACCAATATGTGATGAGAATAGCAGATATGATTGATGGAGAAATTGCTTCCATAGTTCCCCAGTGGCAGCCCGGGCAAGGCATCGAGAATACGATGGATCAAACTTTTGATCATATTTGTGCTTCAAATCGTACATCCTACGGCTCTGTAATGGAGTTTTTAACGATGAACGATTCTGGCAAGGACTTGCAGGTTCTTCAATGTTGTAAAAATGGCTGTTCTTCCACACTCGGAGTAGCTTCCGAGCAACTGATGGCAATGAGGATCATTTGA	1521	40.57	MNDRTHTEPGYSEFVEVDPTGRYGRYDEILGKGSSKTVYRAFDEYEGIEVAWNQIKLYDFLQCPEDLERLYSEIHLLKTLKHKNIMKLYASWVDTSNRNINFVTEMFTSGTLRQYRLKHRRVNIRAVKHWCRQILKGLVYLHSHDPPVIHRDLKCDNIFVNGNQGEVKIGDLGLAAIRRKSHEDHCVGTPEFMAPEVYEEAYNELVDIYSFGMCLLEMVTFEYPYSECTHPAQIYKKVTSGKKPDAFYKVNDPEVKQFVEKCLATLSLRLSARELLNDSFLRIKDREYDLRLLDCGSRDEGHLIRQPFFDLNGGKSTVCSGGSDDYNYFDASSKWGYPSVEVERSGIELFERRDDGHYEEVDISITGKRRENGEIFLRLRISDKDGVIRNIYFPFDTKIDTALSVATEMVAELDIMDQYVMRIADMIDGEIASIVPQWQPGQGIENTMDQTFDHICASNRTSYGSVMEFLTMNDSGKDLQVLQCCKNGCSSTLGVASEQLMAMRII	506

Gff information

Chromosome	Start	End	Strand	Old_gene	Gene	Num
8	21132368	21136202	+	Bda029708.1	Bda08g01022	11878

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Bda08g01022	506	CDD	STKc_WNK	22	281	-	-
	Bda08g01022	506	PANTHER	SERINE/THREONINE-PROTEIN KINASE WNK1	1	495	-	-
	Bda08g01022	506	Pfam	Protein kinase domain	27	281	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Bda08g01022	506	SMART	serkin_6	24	281	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Bda08g01022	506	SUPERFAMILY	Protein kinase-like (PK-like)	18	281	IPR011009	-
	Bda08g01022	506	ProSiteProfiles	Protein kinase domain profile.	24	281	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Bda08g01022	506	Gene3D	Phosphorylase Kinase; domain 1	10	105	-	-
	Bda08g01022	506	ProSitePatterns	Serine/Threonine protein kinases active-site signature.	148	160	IPR008271	GO:0004672\|GO:0006468
	Bda08g01022	506	PANTHER	SERINE/THREONINE-PROTEIN KINASE WNK WITH NO LYSINE -RELATED	1	495	-	-
	Bda08g01022	506	Gene3D	Transferase(Phosphotransferase) domain 1	107	286	-	-

Event-related genes

Select	Gene_1	Gene_2	Event_name
	Bda01g01021	Bda08g01022	BCT

Duplication type information

Select	Gene1	Location1	Gene2	Location2	E-value	Duplicated-type
	Bda01g01021	Bda-Chr1:43810050	Bda08g01022	Bda-Chr8:21132368	0	dispersed
	Bda03g00889	Bda-Chr3:7681203	Bda08g01022	Bda-Chr8:21132368	0	dispersed
	Bda08g01022	Bda-Chr8:21132368	Bda14g00794	Bda-Chr14:6140531	6.01E-172	dispersed

Transcription factors information

Select	Gene	Hmm_acc	Hmm_name	Score	E-value	Regulatory Factors	Family
	69775	PF00069	Pkinase	1.90E-49	CL0016	Bda	PK

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Bda08g01022	K08867		-	zju:107412273	768.074