Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda08g01026 ATGAAACACATTTTAAAGAAGCTTCACAAAGGAAGCAATCACGAAACCAATCGGACCAACGAGACGCCAATCGCCACATCTCCGTCTTGTGCCACTGATCATGGAACAGGCTCTGTCCAGACGTCTGGAAATTCTCCGGCCAGTCCTTCTTCGTTGCCGTCTATTCCAGCTGTTCCTGCTGGTGGCGTTCCCGCCACTCCGCCCTCGGCGGTCTCGAATTTGCCCGATTACATTTCATCGGAGGAAGAATTTCAGGTCCAACTTGCCCTAGCGATTAGCGCCTCGAATTCTGACTTCCATGGCGATCCGGAGACGGATCAAATTCGAGCAGCGACACTGTTGAGCTTGGGTAATAATCGTTCTGATTCAGCTACTAAGGTCAAGAACGAAGATGCCGAGGCACTGTCGAGGCAGTATTGGGAATACAATCTGCTCGACTATGAGGAAAAAGTTGTGGACGGGTTTTATGATATATATGGAATCTCCTCTGGTTCCGCTATTCAAGAAAAAATGCCCTCACTTGCTGATTTGGAATTAAGCCCTTGTAGTACTAGCTTTGAAGTCATCGTAGTCAATAGAAAAATTGATCGTGCGCTGGAGGAGCTAGTGCAAATCGCTCAATGTATTGCTGACTTTCCTGGCAACAAGATTGATATTTTAGTGCAGAGACTAGCTGAACTTGTTACTGAACATATGGGTGGACCTGTGTTGGATGCTACTATAATGTTTGCAAGATGGATGGAGCAAAGCACAGAGTTGAGGACATCTCTCCATACCAGTCTGTTGCCTATTGGATCTATAAATATTGGCTTGTCAAGACATCGTGCTTTGCTTTTCAAGGTGTTGGCTGACAGTATCAGAATGCCTTGTAGACTTCTAAAAGGTAGTCATTACACGGGATTTGAGGATGATGCAGTAAACATTATAAAGCTGGAGGATGAAAGAGATTATTTGGTTGATCTAATGGCAGCACCAGGAACACTAATTCCAGCTGATATTTTAAGTTCAAAAGATACCATCCCAAATCCTTACAACTCAAAAATAAGTCAAATTCATCATCGTTGTTCGTCATCTTTCTCAGAATTAGCATCATCACAAGGAAAGGATGGCGGTCAAAGTAGTTTAATGGTGGATGGAACACTCGATACTGGAAATATGGGATCAGTGTCTTCACAATCAAATGGTGATAGTTTTGTTTCTTCTTCTGGAATATCAAACAAAGTAACTCCTAAGCAATTTGATAATATCTCCTCATCAGCCATTGGGAAGTCTCAGTACAAAGGGGGTTTAGCAGTTGGCAGTGGTACTAGGATGAATGTCAATGTAATTCCATACACCCAAAAGACCCCAGAAGATTCTAATGACCTCTTTGCCGATCTTAATCCATTTAAGATCAAAGGAAGCGGCAAAAATTTCATGCATCATGCAACATCAGATTATAATGTTGTTGAATCACAGAGACTGAGAAATCCTGGTCGACCCCCTGTGCCATTGATGTGGAAGAACCGACATGCTTGTAATGAAGTTCCTAAGAAAAAAGAGAACGACTTAATGGGTGTTTTTGTTCCACAAAATAGCTATGGCTTAAATCATTATAACATGTCCACATCTGCTGCTTCAAGCTCCAATGTACCTGTCAAAGTGAATTCTGGAAGTTTCACATCATCACATAATTTAAACATGCCCGTTAAACACACAAACACTACAGAGTTTGCATCCAGTAGCACTAAGTGTGTTACTAGTCAGCTTAGCAACATGGCGACTTCAGTTGACGAGCAAAGTAGTAATTCAAATGGAGAATGTACTATGAACGAGAAAATTTTACAGAATGATACAGTTGATATGATTAAAGAACATGAAGACTGTAGTAGATTCCATGATCGAAAAAAGGTCGCCCCTGACAGGTTTTGGGAATCCAATTTAAAATTTAAGGCCCCGGAGAAACCCAGCTCATCTGGAACTTTCAGCTCAATCAGGGTTGTGAAAGAATTTGATGATGTGGACGTAGGTGAATGCGAAATCGCTTGGGAAGACCTGGTTATCGGTGAAAGGATTGGGCTAGGTTCATATGGAGAGGTCTACCGTGCTGATTGGAATGGCATGGAGGTAGCTGTGAAGAAGTTTCTAGATCAAGATTTCTCCGGGCCTGCTTTGGCTGAGTTCAAAAGGGAAGTACTAATAATGCGTCAACTGCGCCATCCAAATGTTGTTCTTTTTGTTGGCGCTGCCACCCGTACCCCAAATCTCTCCATCATTACTGAGTTTCTTCCCAGAGGAAGCTTATATCGGATCATTCACCATCCGCATTGCCCAATTGATGAAAAACGAAGAATAAAGATGGCTCTTGATGTGGCACAGGGCATGAAATGCTTGCATACAAGCAGACCAACCATTGTGCACCGTGATTTGAAGTCGCCAAATCTCCTGGTTGATGAGAACTGGAATGTCAAGGTGGGTGATTTTGGGTTGTCCCGCTTGAAGCACCATACATTTTTATCATCCAAATCAACTGGTGGAACGCCTGAGTGGATGGCACCTGAAGTTCTCCGCAATGAACCCTCGAATGAGAAGTGTGATGTTTATAGCTTTGGAGTCATTTTGTGGGAGCTTGCAACTTTGAGATTGCCTTGGAGTGGGATGAACCCAATGCAAGTTGTAGGGGCAGTAGGCTTTCAGAATCGCCGGCTTGAAATCCCGAAAGAAGTTGACCCTGGGGTTGCCAAAATTATTTGGGAATGTTGGCAGACAGATCCAAATCTGCGCCCCTCATTTGCACAGCTCACCGAGGCTCTAAATGCTCTGCAGCGGCTTGTCATATCATCACATCTTGACCGGACAAGCTCAGCTTTGCTACCAGAGATTACAGTAAATTCTACACCCTGA 2883 43.43 MKHILKKLHKGSNHETNRTNETPIATSPSCATDHGTGSVQTSGNSPASPSSLPSIPAVPAGGVPATPPSAVSNLPDYISSEEEFQVQLALAISASNSDFHGDPETDQIRAATLLSLGNNRSDSATKVKNEDAEALSRQYWEYNLLDYEEKVVDGFYDIYGISSGSAIQEKMPSLADLELSPCSTSFEVIVVNRKIDRALEELVQIAQCIADFPGNKIDILVQRLAELVTEHMGGPVLDATIMFARWMEQSTELRTSLHTSLLPIGSINIGLSRHRALLFKVLADSIRMPCRLLKGSHYTGFEDDAVNIIKLEDERDYLVDLMAAPGTLIPADILSSKDTIPNPYNSKISQIHHRCSSSFSELASSQGKDGGQSSLMVDGTLDTGNMGSVSSQSNGDSFVSSSGISNKVTPKQFDNISSSAIGKSQYKGGLAVGSGTRMNVNVIPYTQKTPEDSNDLFADLNPFKIKGSGKNFMHHATSDYNVVESQRLRNPGRPPVPLMWKNRHACNEVPKKKENDLMGVFVPQNSYGLNHYNMSTSAASSSNVPVKVNSGSFTSSHNLNMPVKHTNTTEFASSSTKCVTSQLSNMATSVDEQSSNSNGECTMNEKILQNDTVDMIKEHEDCSRFHDRKKVAPDRFWESNLKFKAPEKPSSSGTFSSIRVVKEFDDVDVGECEIAWEDLVIGERIGLGSYGEVYRADWNGMEVAVKKFLDQDFSGPALAEFKREVLIMRQLRHPNVVLFVGAATRTPNLSIITEFLPRGSLYRIIHHPHCPIDEKRRIKMALDVAQGMKCLHTSRPTIVHRDLKSPNLLVDENWNVKVGDFGLSRLKHHTFLSSKSTGGTPEWMAPEVLRNEPSNEKCDVYSFGVILWELATLRLPWSGMNPMQVVGAVGFQNRRLEIPKEVDPGVAKIIWECWQTDPNLRPSFAQLTEALNALQRLVISSHLDRTSSALLPEITVNSTP 960
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 21310137 21321108 + Bda029715.1 Bda08g01026 11882
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda08g01026 960 MobiDBLite consensus disorder prediction 1 67 - -
Bda08g01026 960 ProSiteProfiles Protein kinase domain profile. 679 938 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bda08g01026 960 Gene3D Transferase(Phosphotransferase) domain 1 758 941 - -
Bda08g01026 960 MobiDBLite consensus disorder prediction 17 51 - -
Bda08g01026 960 PANTHER SERINE/THREONINE-PROTEIN KINASE EDR1 69 952 - -
Bda08g01026 960 PRINTS Tyrosine kinase catalytic domain signature 858 880 IPR001245 GO:0004672|GO:0006468
Bda08g01026 960 PRINTS Tyrosine kinase catalytic domain signature 902 924 IPR001245 GO:0004672|GO:0006468
Bda08g01026 960 PRINTS Tyrosine kinase catalytic domain signature 792 810 IPR001245 GO:0004672|GO:0006468
Bda08g01026 960 PRINTS Tyrosine kinase catalytic domain signature 839 849 IPR001245 GO:0004672|GO:0006468
Bda08g01026 960 PRINTS Tyrosine kinase catalytic domain signature 753 766 IPR001245 GO:0004672|GO:0006468
Bda08g01026 960 Pfam Ethylene-responsive protein kinase Le-CTR1 132 329 - -
Bda08g01026 960 Gene3D Phosphorylase Kinase; domain 1 672 756 - -
Bda08g01026 960 CDD STKc_MAP3K-like 685 931 - -
Bda08g01026 960 SMART serkin_6 679 938 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bda08g01026 960 ProSitePatterns Serine/Threonine protein kinases active-site signature. 798 810 IPR008271 GO:0004672|GO:0006468
Bda08g01026 960 SUPERFAMILY Protein kinase-like (PK-like) 667 942 IPR011009 -
Bda08g01026 960 ProSitePatterns Protein kinases ATP-binding region signature. 685 707 IPR017441 GO:0005524
Bda08g01026 960 Pfam Protein tyrosine and serine/threonine kinase 680 931 IPR001245 GO:0004672|GO:0006468
Bda08g01026 960 PANTHER SERINE-THREONINE PROTEIN KINASE 69 952 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda01g00621 Bda-Chr1:33212770 Bda08g01026 Bda-Chr8:21310137 4.78E-14 dispersed
Bda03g01169 Bda-Chr3:13341480 Bda08g01026 Bda-Chr8:21310137 6.06E-107 dispersed
Bda08g00332 Bda-Chr8:3407379 Bda08g01026 Bda-Chr8:21310137 3.22E-107 dispersed
Bda08g01026 Bda-Chr8:21310137 Bda11g00804 Bda-Chr11:7975647 2.86E-33 dispersed
Bda08g01026 Bda-Chr8:21310137 Bda11g01805 Bda-Chr11:53078072 6.18E-61 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
69776 PF07714 PK_Tyr_Ser-Thr 8.00E-62 CL0016 Bda PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda08g01026 - - qsu:112030473 1152.89