Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Bda08g01030 | ATGGGGTGTATACATAGCCGAGAAATATCTTCTCAGAATGTCGTAAGCTCAGAGGTTAAGAGGGAAATAAGTTCTGCTAATCTATCAAATAGGAAGGTAGATGATGATTTAGAGCAGGTGGCACCAAAAGCAGGTTCTAATGCTGTCGACGAACTTAATGGCTTGGCTGAGAAAGATATAAAAGCGGGCGAGGATCGGTATGTGTCACGGGAAAGAAGAAAGTCTAGGCCAAAACAAAGGTCGAATGTTAATCTGAAGCAGTCACCAGGGGAGCAGCTGGCTGCAGGATGGCCGCCTTGGCTTACAGCAGTGTGCGGAGAGGCACTCAATGGTTTGGTCCCACGGAGGGCAGATTCATTCGAAAAAATTGAAAAGATTGGACAGGGAACTTATAGCAATGTATATAAAGCTAAAGATACAATCACAGGTAAAATTGTTGCACTAAAGAAGGTTAGATTTGACAATGCGGAGCCAGAGAGTGTGAAATTTATGGCGAGAGAGATACATATTTTGCGGCAGTTAGATCATCCTAATGTTATAAAGTTGGAGGGAATAGTTACATCAAGGATGGGGTATAGTTTGTATCTGGTGTTTGAGTATATGGATCATGATTTAGCTGGCCTTGCTGCAAACCCAGACATTAAATTTACAGAACCCCAGGTCAAGTGTTTTATGCATCAGCTATTATCTGGACTGGAGCACTGTCATAATCACGGTGTGCTTCATCGTGACATCAAAGGGTCTAATCTTCTTATTGATAGTGGAGGAGTACTAAAGATTGCTGATTTTGGCTTGGCTTCTTTCTTTGATCCTAACCACAAACATCCCATGACTAGTCGTGTGGTTACATTATGGTACCGACCACCTGAGCTTCTACTTGGGGCTACTGATTATGGTGTGGGAATAGACCTATGGAGTGCTGGTTGTATTGTAGCTGAGTTATTAGCCAGGAGGCCCATTCTGCCTGGCCGTAATGAGGTAGAGCAACTACATAAGATATACAAGCTTTGTGGCTCACCTTCTAATGATTACTGGAAAAGAGCAAAATTGCCAAATGCAGCCTTATTTAAGCCCCCACAACCTTACAACAGATGTATAAGAGAGACATTTAAAGATTTTCCGCCCTCATCTTTCCCTCTGATTGAGAGTCTTCTCGCAATTGATCCAGCAGAAAGAAAAACAGCAACAATTGCATTAGAAAGTGAGTTCTTCATCACGAAACCCTATGCTTGTGAGCCTTCTAGTTTACCAAAATTCCCTCCTAGTAAGGAGATTGATGTAAAACGACGGGATGATGAAGCTCGGAGATTAAGAGCAGCCAGTAAGGCTCAGGGTGATGGCGTGAAGCAAAAACGAACTCGTGGCCGTGCTCCAAGGGCTGCGCCGGCTCCTGAAGCTAATGCCGAATTCCAACCAAATATAGATAGAAGGCGTCTAATAACACGGGCAAACGCCAAGAGTAAGAGCGAGAAATTTCCTCCTCCACATCAAGACGGAGAAATTGGCTTTCCATTTGGATATTTGCAGCACAACGATCCTGCCAATGCTACAAAAGGCATCCCATTTAGCACAACCTCACTTGGCAATTCGAAAGACTCCGATCAAGCCTGGTCCGGTCCATTGGTTAACACTTCCAGAGTTGGCGCCTCTAGACCGAATAAGCATGGCGGTGGCAATGCTTTGAAATACTCTAAAGGGAAGAGTTTGGTTTAG | 1713 | 44.02 | MGCIHSREISSQNVVSSEVKREISSANLSNRKVDDDLEQVAPKAGSNAVDELNGLAEKDIKAGEDRYVSRERRKSRPKQRSNVNLKQSPGEQLAAGWPPWLTAVCGEALNGLVPRRADSFEKIEKIGQGTYSNVYKAKDTITGKIVALKKVRFDNAEPESVKFMAREIHILRQLDHPNVIKLEGIVTSRMGYSLYLVFEYMDHDLAGLAANPDIKFTEPQVKCFMHQLLSGLEHCHNHGVLHRDIKGSNLLIDSGGVLKIADFGLASFFDPNHKHPMTSRVVTLWYRPPELLLGATDYGVGIDLWSAGCIVAELLARRPILPGRNEVEQLHKIYKLCGSPSNDYWKRAKLPNAALFKPPQPYNRCIRETFKDFPPSSFPLIESLLAIDPAERKTATIALESEFFITKPYACEPSSLPKFPPSKEIDVKRRDDEARRLRAASKAQGDGVKQKRTRGRAPRAAPAPEANAEFQPNIDRRRLITRANAKSKSEKFPPPHQDGEIGFPFGYLQHNDPANATKGIPFSTTSLGNSKDSDQAWSGPLVNTSRVGASRPNKHGGGNALKYSKGKSLV | 570 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
8 | 21356620 | 21361385 | + | Bda029719.1 | Bda08g01030 | 11886 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Bda08g01030 | 570 | Gene3D | Transferase(Phosphotransferase) domain 1 | 203 | 443 | - | - | |
Bda08g01030 | 570 | CDD | STKc_CDK9_like | 120 | 404 | - | - | |
Bda08g01030 | 570 | MobiDBLite | consensus disorder prediction | 471 | 495 | - | - | |
Bda08g01030 | 570 | SMART | serkin_6 | 120 | 404 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Bda08g01030 | 570 | Pfam | Protein kinase domain | 120 | 404 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Bda08g01030 | 570 | SUPERFAMILY | Protein kinase-like (PK-like) | 115 | 409 | IPR011009 | - | |
Bda08g01030 | 570 | ProSiteProfiles | Protein kinase domain profile. | 120 | 404 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Bda08g01030 | 570 | MobiDBLite | consensus disorder prediction | 516 | 550 | - | - | |
Bda08g01030 | 570 | MobiDBLite | consensus disorder prediction | 422 | 453 | - | - | |
Bda08g01030 | 570 | ProSitePatterns | Protein kinases ATP-binding region signature. | 126 | 149 | IPR017441 | GO:0005524 | |
Bda08g01030 | 570 | Gene3D | Phosphorylase Kinase; domain 1 | 109 | 202 | - | - | |
Bda08g01030 | 570 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 240 | 252 | IPR008271 | GO:0004672|GO:0006468 | |
Bda08g01030 | 570 | MobiDBLite | consensus disorder prediction | 415 | 570 | - | - | |
Bda08g01030 | 570 | MobiDBLite | consensus disorder prediction | 67 | 91 | - | - | |
Bda08g01030 | 570 | PANTHER | OS01G0367700 PROTEIN | 65 | 555 | - | - | |
Bda08g01030 | 570 | PANTHER | CELL DIVISION PROTEIN KINASE | 65 | 555 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Bda08g01030 | Bda-Chr8:21356620 | Bda11g01584 | Bda-Chr11:49137799 | 0 | dispersed | |
Bda08g01030 | Bda-Chr8:21356620 | Bda13g00161 | Bda-Chr13:2092316 | 0 | transposed |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
69777 | PF00069 | Pkinase | 4.00E-68 | CL0016 | Bda | PK |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Bda08g01030 | K08819 | - | pvy:116114591 | 796.964 |