Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda08g01030 ATGGGGTGTATACATAGCCGAGAAATATCTTCTCAGAATGTCGTAAGCTCAGAGGTTAAGAGGGAAATAAGTTCTGCTAATCTATCAAATAGGAAGGTAGATGATGATTTAGAGCAGGTGGCACCAAAAGCAGGTTCTAATGCTGTCGACGAACTTAATGGCTTGGCTGAGAAAGATATAAAAGCGGGCGAGGATCGGTATGTGTCACGGGAAAGAAGAAAGTCTAGGCCAAAACAAAGGTCGAATGTTAATCTGAAGCAGTCACCAGGGGAGCAGCTGGCTGCAGGATGGCCGCCTTGGCTTACAGCAGTGTGCGGAGAGGCACTCAATGGTTTGGTCCCACGGAGGGCAGATTCATTCGAAAAAATTGAAAAGATTGGACAGGGAACTTATAGCAATGTATATAAAGCTAAAGATACAATCACAGGTAAAATTGTTGCACTAAAGAAGGTTAGATTTGACAATGCGGAGCCAGAGAGTGTGAAATTTATGGCGAGAGAGATACATATTTTGCGGCAGTTAGATCATCCTAATGTTATAAAGTTGGAGGGAATAGTTACATCAAGGATGGGGTATAGTTTGTATCTGGTGTTTGAGTATATGGATCATGATTTAGCTGGCCTTGCTGCAAACCCAGACATTAAATTTACAGAACCCCAGGTCAAGTGTTTTATGCATCAGCTATTATCTGGACTGGAGCACTGTCATAATCACGGTGTGCTTCATCGTGACATCAAAGGGTCTAATCTTCTTATTGATAGTGGAGGAGTACTAAAGATTGCTGATTTTGGCTTGGCTTCTTTCTTTGATCCTAACCACAAACATCCCATGACTAGTCGTGTGGTTACATTATGGTACCGACCACCTGAGCTTCTACTTGGGGCTACTGATTATGGTGTGGGAATAGACCTATGGAGTGCTGGTTGTATTGTAGCTGAGTTATTAGCCAGGAGGCCCATTCTGCCTGGCCGTAATGAGGTAGAGCAACTACATAAGATATACAAGCTTTGTGGCTCACCTTCTAATGATTACTGGAAAAGAGCAAAATTGCCAAATGCAGCCTTATTTAAGCCCCCACAACCTTACAACAGATGTATAAGAGAGACATTTAAAGATTTTCCGCCCTCATCTTTCCCTCTGATTGAGAGTCTTCTCGCAATTGATCCAGCAGAAAGAAAAACAGCAACAATTGCATTAGAAAGTGAGTTCTTCATCACGAAACCCTATGCTTGTGAGCCTTCTAGTTTACCAAAATTCCCTCCTAGTAAGGAGATTGATGTAAAACGACGGGATGATGAAGCTCGGAGATTAAGAGCAGCCAGTAAGGCTCAGGGTGATGGCGTGAAGCAAAAACGAACTCGTGGCCGTGCTCCAAGGGCTGCGCCGGCTCCTGAAGCTAATGCCGAATTCCAACCAAATATAGATAGAAGGCGTCTAATAACACGGGCAAACGCCAAGAGTAAGAGCGAGAAATTTCCTCCTCCACATCAAGACGGAGAAATTGGCTTTCCATTTGGATATTTGCAGCACAACGATCCTGCCAATGCTACAAAAGGCATCCCATTTAGCACAACCTCACTTGGCAATTCGAAAGACTCCGATCAAGCCTGGTCCGGTCCATTGGTTAACACTTCCAGAGTTGGCGCCTCTAGACCGAATAAGCATGGCGGTGGCAATGCTTTGAAATACTCTAAAGGGAAGAGTTTGGTTTAG 1713 44.02 MGCIHSREISSQNVVSSEVKREISSANLSNRKVDDDLEQVAPKAGSNAVDELNGLAEKDIKAGEDRYVSRERRKSRPKQRSNVNLKQSPGEQLAAGWPPWLTAVCGEALNGLVPRRADSFEKIEKIGQGTYSNVYKAKDTITGKIVALKKVRFDNAEPESVKFMAREIHILRQLDHPNVIKLEGIVTSRMGYSLYLVFEYMDHDLAGLAANPDIKFTEPQVKCFMHQLLSGLEHCHNHGVLHRDIKGSNLLIDSGGVLKIADFGLASFFDPNHKHPMTSRVVTLWYRPPELLLGATDYGVGIDLWSAGCIVAELLARRPILPGRNEVEQLHKIYKLCGSPSNDYWKRAKLPNAALFKPPQPYNRCIRETFKDFPPSSFPLIESLLAIDPAERKTATIALESEFFITKPYACEPSSLPKFPPSKEIDVKRRDDEARRLRAASKAQGDGVKQKRTRGRAPRAAPAPEANAEFQPNIDRRRLITRANAKSKSEKFPPPHQDGEIGFPFGYLQHNDPANATKGIPFSTTSLGNSKDSDQAWSGPLVNTSRVGASRPNKHGGGNALKYSKGKSLV 570
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 21356620 21361385 + Bda029719.1 Bda08g01030 11886
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda08g01030 570 Gene3D Transferase(Phosphotransferase) domain 1 203 443 - -
Bda08g01030 570 CDD STKc_CDK9_like 120 404 - -
Bda08g01030 570 MobiDBLite consensus disorder prediction 471 495 - -
Bda08g01030 570 SMART serkin_6 120 404 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bda08g01030 570 Pfam Protein kinase domain 120 404 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bda08g01030 570 SUPERFAMILY Protein kinase-like (PK-like) 115 409 IPR011009 -
Bda08g01030 570 ProSiteProfiles Protein kinase domain profile. 120 404 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bda08g01030 570 MobiDBLite consensus disorder prediction 516 550 - -
Bda08g01030 570 MobiDBLite consensus disorder prediction 422 453 - -
Bda08g01030 570 ProSitePatterns Protein kinases ATP-binding region signature. 126 149 IPR017441 GO:0005524
Bda08g01030 570 Gene3D Phosphorylase Kinase; domain 1 109 202 - -
Bda08g01030 570 ProSitePatterns Serine/Threonine protein kinases active-site signature. 240 252 IPR008271 GO:0004672|GO:0006468
Bda08g01030 570 MobiDBLite consensus disorder prediction 415 570 - -
Bda08g01030 570 MobiDBLite consensus disorder prediction 67 91 - -
Bda08g01030 570 PANTHER OS01G0367700 PROTEIN 65 555 - -
Bda08g01030 570 PANTHER CELL DIVISION PROTEIN KINASE 65 555 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda08g01030 Bda-Chr8:21356620 Bda11g01584 Bda-Chr11:49137799 0 dispersed
Bda08g01030 Bda-Chr8:21356620 Bda13g00161 Bda-Chr13:2092316 0 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
69777 PF00069 Pkinase 4.00E-68 CL0016 Bda PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda08g01030 K08819 - pvy:116114591 796.964