Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda08g01055 ATGGAAGATAGCACAGCGAGCTCAGAATCATCACCAACAAACTCCTCCACAAACTACACTCACACTCACAACCACGTACACTCCCATTCTGAAACCCAACTTCACCATAAAATCTTAAACTCCAATTCCTTCCTTTTAATCATCATTCCAATCACCATTTTCCTCATTCTCCTCGCCATAACTCTCGCCATTTTGCTTCTCCGACGACTCAAATCCGCCAGGAGGAGTGCAATTTGCAAAGAAAATGGCGGCATTCATCACTCGAGCAGCAGGCTTATTGCTCATACCACAATAAACGTCAATTCTAGCCCAGACGTGAACGGTGGTGGGTGTCTGAACAAGGGAAGCCAAGGAAGAGCAGGTCAAAGCAGATTAAAGGGAGTTCAAGTGTTCACATACAGAGAGCTGGAAACAGCTACGGAGAAATTCAACGAGAGAAACGTGATTTGGAGAGAAGGAAAGGGGGAGGTGTATAGAGGGGTCTTAGGCGATGGGACAGTGGCCGCCATTAAAGCACTGCATCATCGGGAAGGGAAGCACAGAGAGCGTGCCTTTCGGATGGAGGTGGATCTACTGAGCCGGTTGCACTCTCCATGTTTGGTAGAATTACTAGGCTACTGCGCGGACCAAAACCACAGGCTTCTAGTCTTTGAATTCATGCAAAATGGGACCCTCCAAGGCAGCCTTCATCACCACAAGACTTTATCACAACCGTTGGATTGGGGGACCCGGTTAAGGATCGCCCTTGATTGCGCCACGGCACTTGAATTTCTGCATGAACATGCAGTTCCCACGGTGATTCATCGCAATTTCAAGTGCTCTAATGTTTTTCTCGATCGAAATTTTCAAGCCAAGGTGTCGGGATTAGGATCGGCCAAAATGGGATCCGATAAGATCAGCGGTCAGATGTCAACCAACATGCCTGGGACCTCAGGATATCTCGCACCCGAGTATGCTTCAACGGGAAAATTGACAACAAAATCAGATGTATATAGCTATGGAGTTGTGCTGTTGGAGCTCTTGACTGGCCGCAATCCTGTTGATATCAATCGCCCTCCAGGCCAACATGTTCTTGTCTCTTGGGCTCTTCCAAGGTTAACAAATAGAGAGAAACTGATGGAAATGGTTGACCCATCTATACAAGGACAGTACTCAAAGAAAGACTTAATTCAGATAGCAGCCATTGCGGCCATGTGTGTGCAGCCTGAAGCAGATTACAGGCCACTAATGACGGACGTGGTGCAGTCACTGATTCCTCTAGTCAAGAACCCATCTTCAATTGCTTCCTCTGGTTCGTCTAGATTCTTGATTCATACGCCAAGTCCCAAGTACTAA 1335 47.19 MEDSTASSESSPTNSSTNYTHTHNHVHSHSETQLHHKILNSNSFLLIIIPITIFLILLAITLAILLLRRLKSARRSAICKENGGIHHSSSRLIAHTTINVNSSPDVNGGGCLNKGSQGRAGQSRLKGVQVFTYRELETATEKFNERNVIWREGKGEVYRGVLGDGTVAAIKALHHREGKHRERAFRMEVDLLSRLHSPCLVELLGYCADQNHRLLVFEFMQNGTLQGSLHHHKTLSQPLDWGTRLRIALDCATALEFLHEHAVPTVIHRNFKCSNVFLDRNFQAKVSGLGSAKMGSDKISGQMSTNMPGTSGYLAPEYASTGKLTTKSDVYSYGVVLLELLTGRNPVDINRPPGQHVLVSWALPRLTNREKLMEMVDPSIQGQYSKKDLIQIAAIAAMCVQPEADYRPLMTDVVQSLIPLVKNPSSIASSGSSRFLIHTPSPKY 444
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 22669505 22672309 - Bda029756.1 Bda08g01055 11911
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda08g01055 444 ProSiteProfiles Protein kinase domain profile. 143 421 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bda08g01055 444 Gene3D Phosphorylase Kinase; domain 1 115 219 - -
Bda08g01055 444 Pfam Protein tyrosine and serine/threonine kinase 155 417 IPR001245 GO:0004672|GO:0006468
Bda08g01055 444 CDD STKc_IRAK 155 420 - -
Bda08g01055 444 SUPERFAMILY Protein kinase-like (PK-like) 125 417 IPR011009 -
Bda08g01055 444 MobiDBLite consensus disorder prediction 1 28 - -
Bda08g01055 444 MobiDBLite consensus disorder prediction 1 23 - -
Bda08g01055 444 PANTHER OS01G0750732 PROTEIN 1 443 - -
Bda08g01055 444 Gene3D Transferase(Phosphotransferase) domain 1 220 431 - -
Bda08g01055 444 PANTHER SERINE/THREONINE-PROTEIN KINASE CDL1-LIKE 1 443 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda04g00805 Bda-Chr4:57892437 Bda08g01055 Bda-Chr8:22669505 1.98E-80 dispersed
Bda08g01055 Bda-Chr8:22669505 Bda15g00885 Bda-Chr15:14539865 9.27E-106 dispersed
Bda08g01055 Bda-Chr8:22669505 Bda01g00267 Bda-Chr1:27218381 2.01E-87 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
69778 PF07714 PK_Tyr_Ser-Thr 2.20E-37 CL0016 Bda PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda08g01055 - - mcha:111004495 555.829