Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda08g01091 ATGAGCCAGATTGAAATATCTATGACAAGGGCTCCTCTTGTTCCTCTTGCGACTCTAATAGGTCGTGAGCTTAGGAAAGAAAAGGCTGAGAAACCTTTTGTAAAGTTTGGACAGGCTGCTTTGGCAAAGAAAGGAGAGGACTACTTTCTTATAAAACCCGATTGCGAGGGGTTTCCTGGCAACCCGACATCATCATTTTCTGTCTTTGCGATTTTTGACGGGCACAATGGAATATCAGCCGCTATCTTTACAAAAGAACATTTATTGGGAAATGTGTTGAGTGCGATTCCTCAAGGGGTGAGTCGAGAAGAGTGGCTTCAAGCTCTTCCACGGGCTTTGGTTGCAGGTTTTGTAAAAACGGATATTGAGTTTCAACAGAAAGGTGAGACTTCTGGGACTACTGTCACATTTGTTGTGGTTGATGGATGGACTATTACTGTTGCATCTGTTGGAGATTCTCGGTGCATATTGGATACCCAGGGAGGTGTGGTTTCTCTGCTGACTGTAGATCATAGGCTAGAGGAGAATGAAGAGGAGAGGGAGCGTGTGACTGCCAGCGGGGGTGAGGTAGGAAGGCTCAATGTTTTTGGGGGCAATGAGGTCGGGCCTCTCCGCTGCTGGCCAGGTGGATTATGTCTTTCTAGGTCTATTGGTGACACAGATGTGGGAGAATATATTGTTCCCATTCCGCACGTGAAGCAAGTGAAGCTTTCAACTGCTGGAGGACGATTGATTATAGCTTCTGACGGAATTTGGGATGCATTATCGTCTGATATGGCTGCCAAATCTTGTCGTGGTTTACCTGCTGAGCTTGCTGCTAAGTTGGTTGTCAAGGACGCTCTTCGATCGAGGGGTCTGAAAGATGACACCACATGTATAGTTGTCGATATAATCCCATCAGAGCAGCCAGTGCTGCCACCAACTCCGAGTAAGAAACAGAGCATGATAACTTCACTTATTTTTGGGAAGAAATCGCAGAACTTTTCAAACAAGGCTGGGAATAAGCTCTCTGCTGTCGGAGCCGTTGAGGAATTATTTGAAGAGGGTTCTGCAATGCTTGCTGAAAGGCTAGGGAAGGATATACCTTTGGATCCAAATTCCGGAATCTTTAAATGTGCAGTATGCCAAGTGAATCAATCTCCAAACGAAAATTTATCAATGAATTCGGGTCCTTTCTTTTCAACATCATCAAAGCCATGGGAAGGCCCTTTCCTCTGCACAAACTGTCGCAAAAAGAAAGATGCAATGGAAGGGAAAAGGCCTAGCAAGCCCACCATAACGTCCTAG 1287 45.61 MSQIEISMTRAPLVPLATLIGRELRKEKAEKPFVKFGQAALAKKGEDYFLIKPDCEGFPGNPTSSFSVFAIFDGHNGISAAIFTKEHLLGNVLSAIPQGVSREEWLQALPRALVAGFVKTDIEFQQKGETSGTTVTFVVVDGWTITVASVGDSRCILDTQGGVVSLLTVDHRLEENEEERERVTASGGEVGRLNVFGGNEVGPLRCWPGGLCLSRSIGDTDVGEYIVPIPHVKQVKLSTAGGRLIIASDGIWDALSSDMAAKSCRGLPAELAAKLVVKDALRSRGLKDDTTCIVVDIIPSEQPVLPPTPSKKQSMITSLIFGKKSQNFSNKAGNKLSAVGAVEELFEEGSAMLAERLGKDIPLDPNSGIFKCAVCQVNQSPNENLSMNSGPFFSTSSKPWEGPFLCTNCRKKKDAMEGKRPSKPTITS 428
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 24200855 24202847 - Bda029820.1 Bda08g01091 11947
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda08g01091 428 Gene3D - 38 302 IPR036457 -
Bda08g01091 428 Pfam Protein phosphatase 2C 61 266 IPR001932 -
Bda08g01091 428 SMART PP2C_SIG_2 53 297 IPR001932 -
Bda08g01091 428 CDD PP2Cc 43 297 IPR001932 -
Bda08g01091 428 ProSiteProfiles PPM-type phosphatase domain profile. 25 297 IPR001932 -
Bda08g01091 428 PANTHER ALPHABET, ISOFORM E-RELATED 2 427 - -
Bda08g01091 428 PANTHER PROTEIN PHOSPHATASE 2C 5-RELATED 2 427 - -
Bda08g01091 428 SMART PP2C_4 23 295 IPR001932 -
Bda08g01091 428 SUPERFAMILY PP2C-like 43 297 IPR036457 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bda08g01091 Bda12g00431 CCT
Bda01g01636 Bda08g01091 BCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda01g01636 Bda-Chr1:52290418 Bda08g01091 Bda-Chr8:24200855 0 dispersed
Bda03g00218 Bda-Chr3:1692292 Bda08g01091 Bda-Chr8:24200855 3.89E-146 dispersed
Bda08g01091 Bda-Chr8:24200855 Bda01g00652 Bda-Chr1:33517281 6.73E-26 dispersed
Bda07g01724 Bda-Chr7:32271459 Bda08g01091 Bda-Chr8:24200855 0 transposed
Bda12g00431 Bda-Chr12:5305956 Bda08g01091 Bda-Chr8:24200855 0 transposed
Bda01g01642 Bda-Chr1:52409794 Bda08g01091 Bda-Chr8:24200855 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda08g01091 - - tcc:18600536 751.51