Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda08g01098 ATGGCCAACAAGCTTTCAGATGAATTAACCCAGAAAACTGGCATGTTTGGTCTCATGGTCTGGGAAGTAATCGGAATTGCTGTCGGGTTGTTCATCGTTGTCATCCTATCTGTACTCTCATTATGTCTTACGTCGAGAAAGAAGTCGAGGAGAGCTAGGGACAAAATAACGCTTTGTCAAATCCCTGCTGTTTCCAAGGAGATCAAAGAGGTTAGAGTGGAGCAATTATCAGCAGATGAATTTGTTCCACGCGATGGAATTCTTCTCACCATTCATGACAAATCAAATGAAAAAGGTTCAGACAAGGTTTTGGTCCACGTTGATGTGGGGAAGATTAAGAACGGAGACAGTAGCAGCCAGTCAGGTTCGTTTCATCAGTTCGATAAAGATGGAGCTGGATCTCAATCAGGAGAAGAAGGAAGTTCTGGCAAGGTCACCATATACAGACCCTCTTCTTCTTCCTATCCGATTACTGCTCCTTCCCCTCTTTCCGGCCTGCCCGAATTTTCTCACTTGGGTTGGGGTCACTGGTTTACTCTGAGAGATCTTGAGGTTGCTACAAACCGATTCTCCAAAGAAAATGTCCTCGGGGAGGGCGGTTATGGAGTTGTTTATCAGGGGCGTCTAATCAATGGAACTGCAGTGGCAGTGAAAAGGATTCTCAATAATCTGGGTCAGGCGGAGAAAGAATTTCAAGTGGAAGTAGAAGCCATTGGCCATGTGCGCCATAAGAATTTGGTTCGTCTTCTGGGTTATTGCATTGAAGGAACTCACAGGATGCTGGTTTATGAGTATGTCAACAATGGAAACTTAGAGCAGTGGCTTCACGGAGCTATGCATCAGCATGGGTACCTTACTTGGGAGGCACGGATGAAAATTCTACTTGGTACCGCAAAAGCGCTTGCATATTTGCATGAGGCTATTGAGCCTAAAGTGGTGCATCGTGACATTAAGTCGAGCAACATATTGATTGACGACGACTTCAATTCGAAGGTATCAGACTTCGGCCTGGCCAAGTTGCTGGGTGCTGGAAAAAGTCATGTTACAACTCGAGTGATGGGAACCTTCGGATACGTAGCTCCTGAATATGCAAATACTGGTCTTTTGAATGAGAAGAGCGATGTCTATAGCTTTGGGGTTTTGCTTCTCGAAACAATTACCGGAAGAGATCCTGTAGATTACGGACGCCCTTCCCAGGAGGTAAATCTGGTGGATTGGTTGAAAATGATGGTTGGAAGCAGGCGATCGGAAGAAGTTGTTGATCCAAACATGGAGGTAAGGCCATCCACAAGAGCTCTAAAACGAGCACTTTTGACAGCTTTAAGGTGCGTTGACCCTGATTCTGAAAAGAGACCAAAGATGGGTCAAATCGTGCGCATGCTCGAGTCGGAAGAGTATCCACTACCTCGAGAGGATCGAAGGCAGAGAAGAACTCAGGCAAGCAGCACCGACATTGAATCGCAGAGGGAGCATTCTGATACAGACCGGAGCGACAATCTGGCGTCGCGATCGGAAAGCAGGCGGGACCAGCATATGTAA 1539 46.46 MANKLSDELTQKTGMFGLMVWEVIGIAVGLFIVVILSVLSLCLTSRKKSRRARDKITLCQIPAVSKEIKEVRVEQLSADEFVPRDGILLTIHDKSNEKGSDKVLVHVDVGKIKNGDSSSQSGSFHQFDKDGAGSQSGEEGSSGKVTIYRPSSSSYPITAPSPLSGLPEFSHLGWGHWFTLRDLEVATNRFSKENVLGEGGYGVVYQGRLINGTAVAVKRILNNLGQAEKEFQVEVEAIGHVRHKNLVRLLGYCIEGTHRMLVYEYVNNGNLEQWLHGAMHQHGYLTWEARMKILLGTAKALAYLHEAIEPKVVHRDIKSSNILIDDDFNSKVSDFGLAKLLGAGKSHVTTRVMGTFGYVAPEYANTGLLNEKSDVYSFGVLLLETITGRDPVDYGRPSQEVNLVDWLKMMVGSRRSEEVVDPNMEVRPSTRALKRALLTALRCVDPDSEKRPKMGQIVRMLESEEYPLPREDRRQRRTQASSTDIESQREHSDTDRSDNLASRSESRRDQHM 512
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 24441036 24443808 - Bda029831.1 Bda08g01098 11954
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda08g01098 512 ProSitePatterns Protein kinases ATP-binding region signature. 196 218 IPR017441 GO:0005524
Bda08g01098 512 ProSiteProfiles Protein kinase domain profile. 190 469 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bda08g01098 512 Gene3D Phosphorylase Kinase; domain 1 172 265 - -
Bda08g01098 512 MobiDBLite consensus disorder prediction 447 512 - -
Bda08g01098 512 MobiDBLite consensus disorder prediction 115 147 - -
Bda08g01098 512 SUPERFAMILY Protein kinase-like (PK-like) 174 474 IPR011009 -
Bda08g01098 512 CDD STKc_IRAK 196 462 - -
Bda08g01098 512 PANTHER RECEPTOR-LIKE PROTEIN KINASE-RELATED 2 510 - -
Bda08g01098 512 ProSitePatterns Serine/Threonine protein kinases active-site signature. 312 324 IPR008271 GO:0004672|GO:0006468
Bda08g01098 512 Gene3D Transferase(Phosphotransferase) domain 1 266 478 - -
Bda08g01098 512 PANTHER OS01G0323000 PROTEIN 2 510 - -
Bda08g01098 512 SMART serkin_6 190 461 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bda08g01098 512 Pfam Protein kinase domain 191 459 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda08g01098 Bda-Chr8:24441036 Bda13g00324 Bda-Chr13:4119803 8.18E-169 dispersed
Bda08g01371 Bda-Chr8:54296712 Bda08g01098 Bda-Chr8:24441036 0 transposed
Bda14g01440 Bda-Chr14:18817693 Bda08g01098 Bda-Chr8:24441036 0 transposed
Bda01g01668 Bda-Chr1:52811407 Bda08g01098 Bda-Chr8:24441036 0 wgd
Bda01g01658 Bda-Chr1:52705869 Bda08g01098 Bda-Chr8:24441036 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
69779 PF00069 Pkinase 3.20E-48 CL0016 Bda PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda08g01098 - - jre:109008584 877.47