Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Bda08g01098 | ATGGCCAACAAGCTTTCAGATGAATTAACCCAGAAAACTGGCATGTTTGGTCTCATGGTCTGGGAAGTAATCGGAATTGCTGTCGGGTTGTTCATCGTTGTCATCCTATCTGTACTCTCATTATGTCTTACGTCGAGAAAGAAGTCGAGGAGAGCTAGGGACAAAATAACGCTTTGTCAAATCCCTGCTGTTTCCAAGGAGATCAAAGAGGTTAGAGTGGAGCAATTATCAGCAGATGAATTTGTTCCACGCGATGGAATTCTTCTCACCATTCATGACAAATCAAATGAAAAAGGTTCAGACAAGGTTTTGGTCCACGTTGATGTGGGGAAGATTAAGAACGGAGACAGTAGCAGCCAGTCAGGTTCGTTTCATCAGTTCGATAAAGATGGAGCTGGATCTCAATCAGGAGAAGAAGGAAGTTCTGGCAAGGTCACCATATACAGACCCTCTTCTTCTTCCTATCCGATTACTGCTCCTTCCCCTCTTTCCGGCCTGCCCGAATTTTCTCACTTGGGTTGGGGTCACTGGTTTACTCTGAGAGATCTTGAGGTTGCTACAAACCGATTCTCCAAAGAAAATGTCCTCGGGGAGGGCGGTTATGGAGTTGTTTATCAGGGGCGTCTAATCAATGGAACTGCAGTGGCAGTGAAAAGGATTCTCAATAATCTGGGTCAGGCGGAGAAAGAATTTCAAGTGGAAGTAGAAGCCATTGGCCATGTGCGCCATAAGAATTTGGTTCGTCTTCTGGGTTATTGCATTGAAGGAACTCACAGGATGCTGGTTTATGAGTATGTCAACAATGGAAACTTAGAGCAGTGGCTTCACGGAGCTATGCATCAGCATGGGTACCTTACTTGGGAGGCACGGATGAAAATTCTACTTGGTACCGCAAAAGCGCTTGCATATTTGCATGAGGCTATTGAGCCTAAAGTGGTGCATCGTGACATTAAGTCGAGCAACATATTGATTGACGACGACTTCAATTCGAAGGTATCAGACTTCGGCCTGGCCAAGTTGCTGGGTGCTGGAAAAAGTCATGTTACAACTCGAGTGATGGGAACCTTCGGATACGTAGCTCCTGAATATGCAAATACTGGTCTTTTGAATGAGAAGAGCGATGTCTATAGCTTTGGGGTTTTGCTTCTCGAAACAATTACCGGAAGAGATCCTGTAGATTACGGACGCCCTTCCCAGGAGGTAAATCTGGTGGATTGGTTGAAAATGATGGTTGGAAGCAGGCGATCGGAAGAAGTTGTTGATCCAAACATGGAGGTAAGGCCATCCACAAGAGCTCTAAAACGAGCACTTTTGACAGCTTTAAGGTGCGTTGACCCTGATTCTGAAAAGAGACCAAAGATGGGTCAAATCGTGCGCATGCTCGAGTCGGAAGAGTATCCACTACCTCGAGAGGATCGAAGGCAGAGAAGAACTCAGGCAAGCAGCACCGACATTGAATCGCAGAGGGAGCATTCTGATACAGACCGGAGCGACAATCTGGCGTCGCGATCGGAAAGCAGGCGGGACCAGCATATGTAA | 1539 | 46.46 | MANKLSDELTQKTGMFGLMVWEVIGIAVGLFIVVILSVLSLCLTSRKKSRRARDKITLCQIPAVSKEIKEVRVEQLSADEFVPRDGILLTIHDKSNEKGSDKVLVHVDVGKIKNGDSSSQSGSFHQFDKDGAGSQSGEEGSSGKVTIYRPSSSSYPITAPSPLSGLPEFSHLGWGHWFTLRDLEVATNRFSKENVLGEGGYGVVYQGRLINGTAVAVKRILNNLGQAEKEFQVEVEAIGHVRHKNLVRLLGYCIEGTHRMLVYEYVNNGNLEQWLHGAMHQHGYLTWEARMKILLGTAKALAYLHEAIEPKVVHRDIKSSNILIDDDFNSKVSDFGLAKLLGAGKSHVTTRVMGTFGYVAPEYANTGLLNEKSDVYSFGVLLLETITGRDPVDYGRPSQEVNLVDWLKMMVGSRRSEEVVDPNMEVRPSTRALKRALLTALRCVDPDSEKRPKMGQIVRMLESEEYPLPREDRRQRRTQASSTDIESQREHSDTDRSDNLASRSESRRDQHM | 512 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
8 | 24441036 | 24443808 | - | Bda029831.1 | Bda08g01098 | 11954 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Bda08g01098 | 512 | ProSitePatterns | Protein kinases ATP-binding region signature. | 196 | 218 | IPR017441 | GO:0005524 | |
Bda08g01098 | 512 | ProSiteProfiles | Protein kinase domain profile. | 190 | 469 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Bda08g01098 | 512 | Gene3D | Phosphorylase Kinase; domain 1 | 172 | 265 | - | - | |
Bda08g01098 | 512 | MobiDBLite | consensus disorder prediction | 447 | 512 | - | - | |
Bda08g01098 | 512 | MobiDBLite | consensus disorder prediction | 115 | 147 | - | - | |
Bda08g01098 | 512 | SUPERFAMILY | Protein kinase-like (PK-like) | 174 | 474 | IPR011009 | - | |
Bda08g01098 | 512 | CDD | STKc_IRAK | 196 | 462 | - | - | |
Bda08g01098 | 512 | PANTHER | RECEPTOR-LIKE PROTEIN KINASE-RELATED | 2 | 510 | - | - | |
Bda08g01098 | 512 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 312 | 324 | IPR008271 | GO:0004672|GO:0006468 | |
Bda08g01098 | 512 | Gene3D | Transferase(Phosphotransferase) domain 1 | 266 | 478 | - | - | |
Bda08g01098 | 512 | PANTHER | OS01G0323000 PROTEIN | 2 | 510 | - | - | |
Bda08g01098 | 512 | SMART | serkin_6 | 190 | 461 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Bda08g01098 | 512 | Pfam | Protein kinase domain | 191 | 459 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Bda08g01098 | Bda-Chr8:24441036 | Bda13g00324 | Bda-Chr13:4119803 | 8.18E-169 | dispersed | |
Bda08g01371 | Bda-Chr8:54296712 | Bda08g01098 | Bda-Chr8:24441036 | 0 | transposed | |
Bda14g01440 | Bda-Chr14:18817693 | Bda08g01098 | Bda-Chr8:24441036 | 0 | transposed | |
Bda01g01668 | Bda-Chr1:52811407 | Bda08g01098 | Bda-Chr8:24441036 | 0 | wgd | |
Bda01g01658 | Bda-Chr1:52705869 | Bda08g01098 | Bda-Chr8:24441036 | 0 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
69779 | PF00069 | Pkinase | 3.20E-48 | CL0016 | Bda | PK |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Bda08g01098 | - | - | jre:109008584 | 877.47 |