Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda08g01181 ATTGCCCCTTTTGATCCTACGAAGAAGAAGAAAAAAAAGAAGGTTGTCATACAGGACTCTGCTGATGACTCTGTGGACAAATTGGCTGAGAAAACAGAGAGTTTAAGTGTTTCGGATGGGCTTGAAAGTGCATTTTCTGGCTTAAAAAAGAAAAAGAAAAAGCCTGTATGTATGTTTTCTTGGAAATTAACTATCATGGACTTTGCAGAACATGCTGTAGAAAACGAGGAAGCAGAAGGAATTGTTTTACAGGCACGCTATCCATGGGAAGGGAGTAATCGCGATTATGAATATGAGGAGCTTCTTGGCAGGGTGTTTAATATTCTCCGGGAGAATAATCCAGAACTGGCAGGCGATAGGCGTAGGACAGTTATGAGGCCTCCTCAAGTTCTTCGTGAGGGAACAAAGAAAACAGTTTTTGTGAACTTTATGGATCTATGCAAATCGATGCATCGACAGCCGGACCATGTCATGACTTTCCTTTTGGCTGAATTGGGGACAAGTGGATCACTTGATGGGCAGCAAAGATTAGTTGTGAAAGGAAGATTTGCACCTAAAAACTTCGAAGGAATTCTGCGTCGTTATATTAATGATTATGTGATTTGCTTTGGGTGCAAAAGTCCAGACACTATACTTTCAAAGGAGAACCGGCTTTTCTTCCTTAGGTGTGAGAAGTGTGGTTCTGGCCGATCGGTTGCTCCAATCAAAGCTGGTTTTGTTGCTCGTGTTGGTCGCAGAAATGCCGGAACA 750 42.4 IAPFDPTKKKKKKKVVIQDSADDSVDKLAEKTESLSVSDGLESAFSGLKKKKKKPVCMFSWKLTIMDFAEHAVENEEAEGIVLQARYPWEGSNRDYEYEELLGRVFNILRENNPELAGDRRRTVMRPPQVLREGTKKTVFVNFMDLCKSMHRQPDHVMTFLLAELGTSGSLDGQQRLVVKGRFAPKNFEGILRRYINDYVICFGCKSPDTILSKENRLFFLRCEKCGSGRSVAPIKAGFVARVGRRNAGT 250
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 47444145 47448242 + Bda034041 Bda08g01181 12037
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda08g01181 250 PANTHER BNAA02G05130D PROTEIN 1 247 - -
Bda08g01181 250 SUPERFAMILY Translation initiation factor 2 beta, aIF2beta, N-terminal domain 95 202 IPR016189 GO:0003743|GO:0006413
Bda08g01181 250 SMART eIF2Bneu4 120 229 IPR002735 GO:0003743|GO:0006413
Bda08g01181 250 SUPERFAMILY Zinc-binding domain of translation initiation factor 2 beta 199 234 IPR016190 GO:0003743|GO:0006413
Bda08g01181 250 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 1 247 IPR045196 GO:0003743|GO:0006413
Bda08g01181 250 Pfam Domain found in IF2B/IF5 119 228 IPR002735 GO:0003743|GO:0006413
Bda08g01181 250 Gene3D - 93 235 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda08g01181 Bda-Chr8:47444145 Bda01g01394 Bda-Chr1:49856022 1.84E-08 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda08g01181 K03238 - zju:107411571 426.787