Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Bda08g01191 GGGGGAGCTTGTGGGTATGGAAACTTGTATTCAACGGGGTATGGAATAAGATCAGCTGCGTTGAGTACTGCATTATTCAACAATGGAGCTTCCTGTGGACAGTGCTTTAAAATTGTGTGTGATTATAAAACAGACCCCAAATGGTGCAAGAAAGGAGCCTCTGTAATTGTCACTGCAACTAACTTTTGCCCTTCAAATAACGCCCTTCCCAGCAACAATGGCGGCTGGTGCAATCCTCCCCGTCTGCACTTCGACATGGCCCAGCCTTCTTGGGAGCAAATCGGCATTTACAGAGGAGGCATCATTCCTGTTTTGTACCAAAGGGTCCCTTGCACAAAGTCGGGAGGAGTTAGGTTCACGATCAATGGACACGATTACTTTGAACTTGTTTTGATTAGCAACGTGGCTGGTGCTGGATCAATCAAGTCAGTGTCGATCAAAGGGTCGAAAACAAATTGGGTAGCATTGTCAAGAAACTGGGGGGCTAATTGGCAGTCTATTTCCTACTTCAATAAACAATCTCTATCCTTCTAA 534 45.51 GGACGYGNLYSTGYGIRSAALSTALFNNGASCGQCFKIVCDYKTDPKWCKKGASVIVTATNFCPSNNALPSNNGGWCNPPRLHFDMAQPSWEQIGIYRGGIIPVLYQRVPCTKSGGVRFTINGHDYFELVLISNVAGAGSIKSVSIKGSKTNWVALSRNWGANWQSISYFNKQSLSF 177
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
8 48014944 48015784 + Bda030143.1 Bda08g01191 12047
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Bda08g01191 177 PANTHER EXPANSIN 1 177 - -
Bda08g01191 177 Pfam Expansin C-terminal domain 117 177 IPR007117 -
Bda08g01191 177 Gene3D - 116 177 IPR036749 -
Bda08g01191 177 PRINTS Expansin signature 55 65 IPR002963 GO:0009664
Bda08g01191 177 PRINTS Expansin signature 42 53 IPR002963 GO:0009664
Bda08g01191 177 PRINTS Expansin signature 127 148 IPR002963 GO:0009664
Bda08g01191 177 PRINTS Expansin signature 74 91 IPR002963 GO:0009664
Bda08g01191 177 PRINTS Expansin signature 13 27 IPR002963 GO:0009664
Bda08g01191 177 PRINTS Expansin signature 162 177 IPR002963 GO:0009664
Bda08g01191 177 PRINTS Expansin signature 91 104 IPR002963 GO:0009664
Bda08g01191 177 PRINTS Expansin signature 115 127 IPR002963 GO:0009664
Bda08g01191 177 SUPERFAMILY Barwin-like endoglucanases 1 134 IPR036908 -
Bda08g01191 177 Gene3D - 1 112 IPR036908 -
Bda08g01191 177 SUPERFAMILY PHL pollen allergen 113 177 IPR036749 -
Bda08g01191 177 Pfam Lytic transglycolase 19 106 IPR009009 -
Bda08g01191 177 ProSiteProfiles Expansin, family-45 endoglucanase-like domain profile. 1 116 IPR007112 -
Bda08g01191 177 ProSiteProfiles Expansin, Cellulose-binding-like domain profile. 126 177 IPR007117 -
Bda08g01191 177 SMART dpbb_1 18 106 IPR007112 -
Bda08g01191 177 PANTHER EXPANSIN-A15 1 177 IPR002963 GO:0009664
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda08g01191 Bda-Chr8:48014944 Bda05g00964 Bda-Chr5:58134678 9.14E-85 dispersed
Bda08g01191 Bda-Chr8:48014944 Bda15g00274 Bda-Chr15:5518006 2.44E-85 transposed
Bda08g01191 Bda-Chr8:48014944 Bda11g01211 Bda-Chr11:12476870 1.88E-85 transposed
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda08g01191 - - cpap:110818133 322.398