Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Bda08g01191 | GGGGGAGCTTGTGGGTATGGAAACTTGTATTCAACGGGGTATGGAATAAGATCAGCTGCGTTGAGTACTGCATTATTCAACAATGGAGCTTCCTGTGGACAGTGCTTTAAAATTGTGTGTGATTATAAAACAGACCCCAAATGGTGCAAGAAAGGAGCCTCTGTAATTGTCACTGCAACTAACTTTTGCCCTTCAAATAACGCCCTTCCCAGCAACAATGGCGGCTGGTGCAATCCTCCCCGTCTGCACTTCGACATGGCCCAGCCTTCTTGGGAGCAAATCGGCATTTACAGAGGAGGCATCATTCCTGTTTTGTACCAAAGGGTCCCTTGCACAAAGTCGGGAGGAGTTAGGTTCACGATCAATGGACACGATTACTTTGAACTTGTTTTGATTAGCAACGTGGCTGGTGCTGGATCAATCAAGTCAGTGTCGATCAAAGGGTCGAAAACAAATTGGGTAGCATTGTCAAGAAACTGGGGGGCTAATTGGCAGTCTATTTCCTACTTCAATAAACAATCTCTATCCTTCTAA | 534 | 45.51 | GGACGYGNLYSTGYGIRSAALSTALFNNGASCGQCFKIVCDYKTDPKWCKKGASVIVTATNFCPSNNALPSNNGGWCNPPRLHFDMAQPSWEQIGIYRGGIIPVLYQRVPCTKSGGVRFTINGHDYFELVLISNVAGAGSIKSVSIKGSKTNWVALSRNWGANWQSISYFNKQSLSF | 177 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
8 | 48014944 | 48015784 | + | Bda030143.1 | Bda08g01191 | 12047 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Bda08g01191 | 177 | PANTHER | EXPANSIN | 1 | 177 | - | - | |
Bda08g01191 | 177 | Pfam | Expansin C-terminal domain | 117 | 177 | IPR007117 | - | |
Bda08g01191 | 177 | Gene3D | - | 116 | 177 | IPR036749 | - | |
Bda08g01191 | 177 | PRINTS | Expansin signature | 55 | 65 | IPR002963 | GO:0009664 | |
Bda08g01191 | 177 | PRINTS | Expansin signature | 42 | 53 | IPR002963 | GO:0009664 | |
Bda08g01191 | 177 | PRINTS | Expansin signature | 127 | 148 | IPR002963 | GO:0009664 | |
Bda08g01191 | 177 | PRINTS | Expansin signature | 74 | 91 | IPR002963 | GO:0009664 | |
Bda08g01191 | 177 | PRINTS | Expansin signature | 13 | 27 | IPR002963 | GO:0009664 | |
Bda08g01191 | 177 | PRINTS | Expansin signature | 162 | 177 | IPR002963 | GO:0009664 | |
Bda08g01191 | 177 | PRINTS | Expansin signature | 91 | 104 | IPR002963 | GO:0009664 | |
Bda08g01191 | 177 | PRINTS | Expansin signature | 115 | 127 | IPR002963 | GO:0009664 | |
Bda08g01191 | 177 | SUPERFAMILY | Barwin-like endoglucanases | 1 | 134 | IPR036908 | - | |
Bda08g01191 | 177 | Gene3D | - | 1 | 112 | IPR036908 | - | |
Bda08g01191 | 177 | SUPERFAMILY | PHL pollen allergen | 113 | 177 | IPR036749 | - | |
Bda08g01191 | 177 | Pfam | Lytic transglycolase | 19 | 106 | IPR009009 | - | |
Bda08g01191 | 177 | ProSiteProfiles | Expansin, family-45 endoglucanase-like domain profile. | 1 | 116 | IPR007112 | - | |
Bda08g01191 | 177 | ProSiteProfiles | Expansin, Cellulose-binding-like domain profile. | 126 | 177 | IPR007117 | - | |
Bda08g01191 | 177 | SMART | dpbb_1 | 18 | 106 | IPR007112 | - | |
Bda08g01191 | 177 | PANTHER | EXPANSIN-A15 | 1 | 177 | IPR002963 | GO:0009664 |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Bda08g01191 | Bda-Chr8:48014944 | Bda05g00964 | Bda-Chr5:58134678 | 9.14E-85 | dispersed | |
Bda08g01191 | Bda-Chr8:48014944 | Bda15g00274 | Bda-Chr15:5518006 | 2.44E-85 | transposed | |
Bda08g01191 | Bda-Chr8:48014944 | Bda11g01211 | Bda-Chr11:12476870 | 1.88E-85 | transposed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Bda08g01191 | - | - | cpap:110818133 | 322.398 |