Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda08g01193 ATGTATCCTATAGTTCCAGGGCATGAGATTACTGGGGTGATAACAAAGGTGGGACAAAACGTGAAGAGATTCAAAGTAGGAGATAGCGTAGGAGTTGGGTGTATAGCAGCGTCGTGCTTGGATTGCGAGTTCTGCGAGGAATCCAAAGAGAATTACTGCGAAAAGCTTCAGTTCACCTACAATGGCGTCTTCTGGGATGGTAGCGTCACATACGGCGGCTACTCAAAAATGCTAGTGGCAGATCAGAGGTATGTGGTGCGAATACCATCGGGTCTGAGAATGGATGCGGCGGCGCCATTGCTGTGCGCAGGAATAACAGTGTTCAGCCCCATGAAAGAGCACAAACTGTTCGAATCGACGGGGAAGAAGATAGGGGTGGTTGGGCTTGGAGGGCTGGGACACGTGGCCGTGAAATTTGGGAAGGCTTTTGGCCACCATGTGACTGTGATAAGCACCTCTCCTTCCAAGGAAAAAGAGGCCAAGGAACATCTTGGTGCTGACAATTTCATTGTCAGCACAAATCCTCAGCAAATGCAGGAGGGGACGAGGAGCTTGGACTTTGTATTGGACACAGTGTCAGCAAAGCATTCAATAGGCCCAATCTTGGAGCTGCTCAAAGTGAACGGAACGTTAGTCGTGGTGGGTGCGCCAGAAGACCCCGTGGAACTGCCGTCCTTCCCGCTCATATTTGGAAAGAGAGCAGTTAAAGGCAGCGTGATCGGAGGGATGAAGGAGACGCAGGAGATGATGGATTTGTGCGGTAAACTCGACATTACGTGCGATGTAGAGGTGATCAAACCAGCCCACATCAACCAGGCTTTCGACCGTCTTGCTAAGAACGACGTGCGCTATCGCTTTGTCATCGACATTGCTGATGCTGCCGCCGCCGTCGCCGCCGCCGCTGCTACAATTTCTTCCAGGCTTTGA 927 51.46 MYPIVPGHEITGVITKVGQNVKRFKVGDSVGVGCIAASCLDCEFCEESKENYCEKLQFTYNGVFWDGSVTYGGYSKMLVADQRYVVRIPSGLRMDAAAPLLCAGITVFSPMKEHKLFESTGKKIGVVGLGGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKEHLGADNFIVSTNPQQMQEGTRSLDFVLDTVSAKHSIGPILELLKVNGTLVVVGAPEDPVELPSFPLIFGKRAVKGSVIGGMKETQEMMDLCGKLDITCDVEVIKPAHINQAFDRLAKNDVRYRFVIDIADAAAAVAAAAATISSRL 308
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 48038839 48040108 - Bda030145.1 Bda08g01193 12049
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda08g01193 308 ProSitePatterns Zinc-containing alcohol dehydrogenases signature. 7 21 IPR002328 GO:0008270|GO:0016491
Bda08g01193 308 PANTHER ALDEHYDE REDUCTASE 1 294 - -
Bda08g01193 308 Pfam Alcohol dehydrogenase GroES-like domain 2 87 IPR013154 -
Bda08g01193 308 PANTHER CINNAMYL ALCOHOL DEHYDROGENASE 6-RELATED 1 294 - -
Bda08g01193 308 Gene3D - 1 289 - -
Bda08g01193 308 Gene3D - 103 260 - -
Bda08g01193 308 SUPERFAMILY GroES-like 2 114 IPR011032 -
Bda08g01193 308 Pfam Zinc-binding dehydrogenase 131 252 IPR013149 -
Bda08g01193 308 CDD CAD1 1 286 - -
Bda08g01193 308 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 93 255 IPR036291 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda07g00164 Bda-Chr7:2044506 Bda08g01193 Bda-Chr8:48038839 6.11E-22 dispersed
Bda08g01193 Bda-Chr8:48038839 Bda14g01068 Bda-Chr14:9251372 1.55E-120 dispersed
Bda08g01193 Bda-Chr8:48038839 Bda14g01063 Bda-Chr14:9141946 7.69E-120 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda08g01193 K00083 - tcc:18591600 473.396