Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda08g01222 ATGGCTTTCCTGACTTTCTTGCCGGAACAATCTGACCCAGAAAAGAGAGAACAGGACGCCAAATCAAAGCGAAAGAGAAAGAAGAAGAAGCCGCCATCTTCATGGGAACAGTTCAAGAGTCTGCTCAGTTGCAAACAGATCGAAGCGAGCAAAGTGCACGACCCGTCGAAAAACACAGGACCCTACTCCAAGCTAGGCTCCTCCTGCAGAGCCATTTGCAGCTTCAAAGACGTGGTCCACGGCAACACTAGAGTCGTTCACAAAGCCGACAACTCGCCCAACTCTACCTCAGTGAGTCAGGAGGCTCGGTTGCTCAGTCGGAGAATTGAAAATCGCCCGTCCGCTCAGTCCGGCAGAGGAATGCAACTGAGACGACTCTCTGGGTGTTACGAATGTCGCATGGTCGTTGACCCAAGCAGATACCCAGTTTCTCGAAATACAATATGTGCATGCCCACAATGCGGAGAGGTCTTCCCCAAGATTGAAAGTTTAGAGCTTCACCAAATACTTCGCCACGCTGTATCGGAGCTGGGGCCGGAGGATGCGGGTCTCAATATCGTGGAGATAATCTTCAAGTCGAGTTGGATGAAGAAAGATAGCCCCGTCTGCAAGATCGAACGGATATTAAAAGTCCACAACACCCAGAGGACGATCCAACGTTTTGAGGAATGCCGGGACTCGGTCAAAACCCGTGCGCTGAACAGCACTAGAAAAAACCCCAGGTGTGCGGCCGATGGAAATGAGCTGCTTCGGTTCCACTGTAGCACTTTATCGTGCGCCCTCGGGACACGTGGCTCGACGAGCTTGTGCGGCTCCATTCCGGGTTGTGGGGTCTGCAATATAATCAGGTATGGCTTTCAAGGAAAGGGCGAGATCAAGGGCGTCAGGACCATGGCTAGCAGCGGCAGGGCCCATGACGCTTTGCGCTGCGGGGAAGGTGGCAGGGCCATGCTCGTATGTCGTGTCATCGCCGGGAGGGTGAAGCGTATTGCGGATGATGCACCCGCGGAGGAGGACAGTGTATCCTCTGCCTCTGGATCATACGACGCCGTAGCGGGGTCCCCCGGGCTCTACTCCAATCTGGAAGATCTCATTGTTTTTAATCCAAGGGCTATCCTTCCCTGCTTTGTGGTGATCTACAAAGCCATGCAATCGTAG 1158 53.45 MAFLTFLPEQSDPEKREQDAKSKRKRKKKKPPSSWEQFKSLLSCKQIEASKVHDPSKNTGPYSKLGSSCRAICSFKDVVHGNTRVVHKADNSPNSTSVSQEARLLSRRIENRPSAQSGRGMQLRRLSGCYECRMVVDPSRYPVSRNTICACPQCGEVFPKIESLELHQILRHAVSELGPEDAGLNIVEIIFKSSWMKKDSPVCKIERILKVHNTQRTIQRFEECRDSVKTRALNSTRKNPRCAADGNELLRFHCSTLSCALGTRGSTSLCGSIPGCGVCNIIRYGFQGKGEIKGVRTMASSGRAHDALRCGEGGRAMLVCRVIAGRVKRIADDAPAEEDSVSSASGSYDAVAGSPGLYSNLEDLIVFNPRAILPCFVVIYKAMQS 385
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 50076592 50078282 - Bda030208.1 Bda08g01222 12078
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda08g01222 385 PANTHER C2H2-LIKE ZINC FINGER PROTEIN 24 384 - -
Bda08g01222 385 PANTHER C2H2-LIKE ZINC FINGER PROTEIN 24 384 - -
Bda08g01222 385 MobiDBLite consensus disorder prediction 1 36 - -
Bda08g01222 385 ProSitePatterns Zinc finger C2H2 type domain signature. 149 172 IPR013087 -
Bda08g01222 385 ProSiteProfiles Zinc finger C2H2 type domain profile. 149 177 IPR013087 -
Bda08g01222 385 SUPERFAMILY ADP-ribosylation 174 382 - -
Bda08g01222 385 Gene3D - 168 384 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bda03g00290 Bda08g01222 CCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda03g00523 Bda-Chr3:4373738 Bda08g01222 Bda-Chr8:50076592 5.49E-103 dispersed
Bda07g00334 Bda-Chr7:4435105 Bda08g01222 Bda-Chr8:50076592 9.44E-61 dispersed
Bda08g01222 Bda-Chr8:50076592 Bda12g00882 Bda-Chr12:39556224 6.51E-60 dispersed
Bda07g00557 Bda-Chr7:6918622 Bda08g01222 Bda-Chr8:50076592 9.39E-67 transposed
Bda03g00290 Bda-Chr3:2522305 Bda08g01222 Bda-Chr8:50076592 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
16318 None None None None Bda TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda08g01222 - - zju:107435832 586.26