Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Bda08g01232 | AAAATGTCTTCAACGTTCAGCGGCGATGAGACGGCACCGTTTTTTGGCTTCCTTGGCGCTGCCGCCGCCCTCGTTTTCTCCTGTATGGGAGCTGCGTACGGAACGGCGAAAAGCGGGGTTGGGGTGGCATCGATGGGTGTGATGAGGCCCGAGCTGGTGATGAAATCGATTGTGCCTGTTGTTATGGCCGGAGTTTTGGGTATCTACGGTCTGATCATTGCTGTGATTATTAGCACAGGGATTAACCCCAAGGCCAAATCCTATTACCTTTTTGATGGCTACGCCCATCTGTCCTCTGGTCTTGCTTGTGGCCTTGCTGGTCTCTCTGCTGGCATGGCAATTGGAATCGTCGGAGATGCTGGTGTTAGAGCCAATGCGCAGCAACCAAAGCTGTTTGTTGGGATGATTCTCATTCTCATCTTCGCTGAAGCACTTGCCCTGTATGGCCTCATTGTTGGCATTATCCTCTCTTCACGAGCAGGTCAGTCCAGAGCCGAATAA | 501 | 52.1 | KMSSTFSGDETAPFFGFLGAAAALVFSCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPVVMAGVLGIYGLIIAVIISTGINPKAKSYYLFDGYAHLSSGLACGLAGLSAGMAIGIVGDAGVRANAQQPKLFVGMILILIFAEALALYGLIVGIILSSRAGQSRAE | 166 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
8 | 50482970 | 50484393 | + | Bda030225.1 | Bda08g01232 | 12088 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Bda08g01232 | 166 | PANTHER | V-TYPE PROTON ATPASE PROTEOLIPID SUBUNIT | 4 | 166 | - | - | |
Bda08g01232 | 166 | CDD | ATP-synt_Vo_c_ATP6C_rpt2 | 90 | 157 | - | - | |
Bda08g01232 | 166 | Gene3D | - | 12 | 163 | IPR035921 | - | |
Bda08g01232 | 166 | PRINTS | Vacuolar ATP synthase 16kDa subunit signature | 31 | 55 | IPR000245 | GO:0033179|GO:0046961|GO:1902600 | |
Bda08g01232 | 166 | PRINTS | Vacuolar ATP synthase 16kDa subunit signature | 57 | 81 | IPR000245 | GO:0033179|GO:0046961|GO:1902600 | |
Bda08g01232 | 166 | PRINTS | Vacuolar ATP synthase 16kDa subunit signature | 108 | 134 | IPR000245 | GO:0033179|GO:0046961|GO:1902600 | |
Bda08g01232 | 166 | PRINTS | Vacuolar ATP synthase 16kDa subunit signature | 135 | 158 | IPR000245 | GO:0033179|GO:0046961|GO:1902600 | |
Bda08g01232 | 166 | SUPERFAMILY | F1F0 ATP synthase subunit C | 15 | 78 | IPR035921 | - | |
Bda08g01232 | 166 | CDD | ATP-synt_Vo_c_ATP6C_rpt1 | 14 | 81 | - | - | |
Bda08g01232 | 166 | SUPERFAMILY | F1F0 ATP synthase subunit C | 88 | 157 | IPR035921 | - | |
Bda08g01232 | 166 | TIGRFAM | V_ATP_synt_C: V-type ATPase, C subunit | 14 | 122 | IPR011555 | GO:0033179|GO:0046961|GO:1902600 | |
Bda08g01232 | 166 | Pfam | ATP synthase subunit C | 18 | 77 | IPR002379 | GO:0015078|GO:0033177|GO:1902600 | |
Bda08g01232 | 166 | Pfam | ATP synthase subunit C | 98 | 156 | IPR002379 | GO:0015078|GO:0033177|GO:1902600 | |
Bda08g01232 | 166 | PANTHER | V-TYPE PROTON ATPASE PROTEOLIPID SUBUNIT | 4 | 166 | - | - |
Event-related genes

Select | Gene_1 | Gene_2 | Event_name |
---|---|---|---|
Bda01g01524 | Bda08g01232 | BCT |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Bda03g00060 | Bda-Chr3:702498 | Bda08g01232 | Bda-Chr8:50482970 | 4.16E-23 | dispersed | |
Bda06g00898 | Bda-Chr6:17380457 | Bda08g01232 | Bda-Chr8:50482970 | 1.62E-113 | transposed | |
Bda01g01524 | Bda-Chr1:51150846 | Bda08g01232 | Bda-Chr8:50482970 | 3.62E-113 | wgd | |
Bda08g00963 | Bda-Chr8:18911450 | Bda08g01232 | Bda-Chr8:50482970 | 6.81E-108 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Bda08g01232 | K02155 | - | cit:102607521 | 288.5 |