Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda08g01320 ATGCCTTTTTCTAAAAATTGCAATCCTGATCAAATCGGGTCAGGTTATAACTCGTCGGTGAATCAACCGGAATCGCTGGCCCACCGGCGGTTCACGAGGCAGAGGAAGCTCAGACACCTCAGTGACGACGACACAGGCATTCATTTCTACCATCATCCTCAGTCGACGCCGTCATCGCCGGATTCGTTAAGAATACAGAGGTCAATGGTTGGTTGTTCGGAACGTTGGTCGTCGTTGGCAGTACCTCAGCCTTTGCCCCTTCCCGAGTTCACTTCAAGGCGGAAAGCAGAGTCTCCGGCTTCGTATTCTTGCCCTGGCCATTACCCTTCCCCACAAGAAACTCCGGGACGGAAGAGCCCCTGTCCAGTGATATTGAATTCAGCTAAAATTTTAGGAAACTGTCAAAAGAAAGTCCCGAGAGATGTAAACTGTGACGGTGTTGATGTTAATTGTGGGCAAACTCTTCCAATGTCGAGGTCGTCACCAATTACCGGATCGTCTGGAGGAACAGTTAGTCCAAGAGGATCGAGTAGAGATGATTTGTTTCGGTCTTATGTTGATACAAGTTCTGCAGAATGTTCAAATAAATATGGTAGGAGGCTCTTTCAAGAACTAAACGTCGAGAGAGGGGGTGAAAGATTGACTCTGAAAGTGTCTTCCAGGAGTACGCCAACGAGTGTTTTGTCGAGTCCAGTTGTTAGCCCGAGGAGATCGAATACTGGAGATTTTTATGCGTCTTTTACGGATCCTCAACAATTTAAAGATTTCCCTTCGTCCGGGGCGGCAAAAATATCTACGCCGAGAATTTCCTGTAGTCCTCCCGATCGTTCTCCTCCCCACAGCCCCACGGCTAAAAGCCCTCTCCATAGCACAAGATCTCCTAACGGAACCGCCTTTGTTCTGCACCATAAACCATTTCAGGAAATTTCGATGGATAGGCCAGAAAATAATGGCCATGTCAATGCCTACCCATTGCCCCTTCCTCCTGTGCCTATCGTTTCCTCCCCACCAACAATGAGTCATCATGTAATGGACAATCCATATGCATCGTTGATGAAAGATAAATGGCAGAAAGGAAAACTCATTGGGAGAGGAACGTTCGGGAGCGTTTATCTGGCGACCAATCGGGAGACCGGTGCTTTATGTGCAATGAAAGAAGTGGATCTCATTGAAGATGATCCTAAATCTGCCGAGTGTATAAAGCAATTAGAGCAGGAAATTAAAGTTCTTCACAAACTAAAACATCCAAATATTGTGCAGTACTATGGAAGTGAAAGAGTGAATGATCATTTTTACATATATTTGGAGTATGTTTATCCGGGCTCGATTAATAAGTACATCCGAGAACATTGTGGAGCTATGACAGAATCCGTTGTTCGCAATTTTTCTCGTCATATTCTCTCCGGGTTGGCTTACTTGCACAGCAAAAAGACCATACATAGGGATATTAAAGGTGCAAATTTACTCGTTGATGCCTTTGGAGTTGTCAAACTTGCAGATTTCGGAATGGCAAAGCATCTTGCAGGTCAATATGATCTTTCTTTGAAGGGCAGTCCTCACTGGATGGCACCGGAGGTCATAAAGGCTTCGATGCAAGGCGGAAACCCGGATCTTGCTTTTGCAGTGGATATATGGAGCTTGGGTTGTACAATAATTGAAATGCTTAATGGAAAACCTCCGTGGAGTGAGTTTGAAGGGCCTTCTGCTATGTTCAAGATCTTGAACAGAAACCCTCCTATACCAGAAACAATATCTTCAGAAGGGAAAGACTTCCTCCATTGTTGTTTTCGAAGAAATCCCGCCGAGAGGCCATCGGCTAATACATTACTCGAGCATCCGTTTTTATGTCACCCGCATGATGAAAATGTTTCGTTCTCGACTCAAGCGTTATCCACGATGAATCTACACGTAATTATCACTCCTACGAGTATTTTTTTTTTAAATGCATTATGTCAATAA 1959 44.72 MPFSKNCNPDQIGSGYNSSVNQPESLAHRRFTRQRKLRHLSDDDTGIHFYHHPQSTPSSPDSLRIQRSMVGCSERWSSLAVPQPLPLPEFTSRRKAESPASYSCPGHYPSPQETPGRKSPCPVILNSAKILGNCQKKVPRDVNCDGVDVNCGQTLPMSRSSPITGSSGGTVSPRGSSRDDLFRSYVDTSSAECSNKYGRRLFQELNVERGGERLTLKVSSRSTPTSVLSSPVVSPRRSNTGDFYASFTDPQQFKDFPSSGAAKISTPRISCSPPDRSPPHSPTAKSPLHSTRSPNGTAFVLHHKPFQEISMDRPENNGHVNAYPLPLPPVPIVSSPPTMSHHVMDNPYASLMKDKWQKGKLIGRGTFGSVYLATNRETGALCAMKEVDLIEDDPKSAECIKQLEQEIKVLHKLKHPNIVQYYGSERVNDHFYIYLEYVYPGSINKYIREHCGAMTESVVRNFSRHILSGLAYLHSKKTIHRDIKGANLLVDAFGVVKLADFGMAKHLAGQYDLSLKGSPHWMAPEVIKASMQGGNPDLAFAVDIWSLGCTIIEMLNGKPPWSEFEGPSAMFKILNRNPPIPETISSEGKDFLHCCFRRNPAERPSANTLLEHPFLCHPHDENVSFSTQALSTMNLHVIITPTSIFFLNALCQ 652
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 53032562 53035683 + Bda030358.1 Bda08g01320 12176
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda08g01320 652 MobiDBLite consensus disorder prediction 216 297 - -
Bda08g01320 652 MobiDBLite consensus disorder prediction 158 174 - -
Bda08g01320 652 MobiDBLite consensus disorder prediction 1 27 - -
Bda08g01320 652 MobiDBLite consensus disorder prediction 83 120 - -
Bda08g01320 652 MobiDBLite consensus disorder prediction 283 297 - -
Bda08g01320 652 ProSiteProfiles Protein kinase domain profile. 356 615 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bda08g01320 652 MobiDBLite consensus disorder prediction 158 180 - -
Bda08g01320 652 SMART serkin_6 356 615 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bda08g01320 652 Gene3D Transferase(Phosphotransferase) domain 1 349 644 - -
Bda08g01320 652 PANTHER MAP KINASE KINASE KINASE SSK2-RELATED-RELATED 18 187 - -
Bda08g01320 652 PANTHER MAP KINASE KINASE KINASE SSK2-RELATED-RELATED 188 636 - -
Bda08g01320 652 MobiDBLite consensus disorder prediction 216 266 - -
Bda08g01320 652 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE KINASE KINASE YODA 18 187 - -
Bda08g01320 652 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE KINASE KINASE YODA 188 636 - -
Bda08g01320 652 MobiDBLite consensus disorder prediction 44 63 - -
Bda08g01320 652 Pfam Protein kinase domain 357 615 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bda08g01320 652 SUPERFAMILY Protein kinase-like (PK-like) 351 627 IPR011009 -
Bda08g01320 652 ProSitePatterns Protein kinases ATP-binding region signature. 362 385 IPR017441 GO:0005524
Bda08g01320 652 MobiDBLite consensus disorder prediction 1 29 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bda01g01685 Bda08g01320 BCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda08g01320 Bda-Chr8:53032562 Bda15g00714 Bda-Chr15:10541285 1.07E-108 dispersed
Bda08g01320 Bda-Chr8:53032562 Bda04g00294 Bda-Chr4:45825341 1.45E-164 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
69780 PF00069 Pkinase 3.70E-70 CL0016 Bda PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda08g01320 - - zju:107420359 652.514