Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Bda08g01363 | ATGGCGGAGCAAGGTAATTGCACGCGTCTCACGCGGGCGGCGAAGAAGAGAGCTGCGGCTGACGAGAATGTCGGGAGTAGGAAAAGAGTGGTTCTGGGAGAGATTCAGAACCTGCCTAACGTTGTAGTTTCGGGCAACCCAAATCCTCCAAAGCAGAAATCTGAGTCGAAGACGAAGGTAAACATGCCACTGACAATGACGTCTACCACAAAGAAGCCGACAACTACGTTGGTGAGAAGTGGCAGTCCAGGATTGGAGAATACCCAAATTTGCGAAGCTTATGTCTTTGACATTTATGGGTACCTTCACAAGTTGGAGGAGAATCCAAAGAGAAGACCACTGCCTGATTACATTTCAAAGGTTCAGAAGGATATCAATGCTGATATGAGAGGAATTTTAGTGGATTGGTTAATTGAAGTTTCGGAGGAATACAAGCTCGTTTCGGACACTCTGTACCTCTCCATTTCCTACATTGACAGATTCCTATCTGTGAGCCAACTCAACAGGCAAAAACTGCAGTTGCTGGGTGTTTCTGCGATGCTGGTTGCCTCAAAGTATGAAGAGATCACTCCACCCCACGTGGAAGACTTTTGCTACATCACAGATAATACCTACACCAAGGAAGAGGTGGTAAAGATGGAGGCTGGTTTGCTCAAGGCTCTAAACTTTGAATTGGGAAATCCTACAATCAAGACATTTCTAAGGCAGGATAATCCCTTATTACATTTTTTGGAACAAAATTTCCTCAAGTTGGAAGTAATTTTGAGTTTGTATCTAATTCTTTTGTGCTTCCTACAGAATCCTAATTTGGAGTTAGAATTTCTAGCCTACTACCTAGCGGAGCTAAGTCTTCTCGATTATAATTGTGTCAAATTTACGCCCTCGCTGGTTGCTGCATCGTCTAGTTTAAGCCTGCAAAAGTGTTCTGGATACAACCCTGTTGATCTAAAGGACTGTGTGCTTCTTATACACGACTTGTATCTCGGCCGAAGAGGAGCTTCTTTGGTGGCTGCCAGAGAGAAATACAAGCAGCATAAGTTCAAGTGTGTGGCAAATATGGCTTCTCCTCCAGAGGTTCCAGTCGCCTATTTTGGAGACGAGACAAAGGATTAG | 1113 | 44.29 | MAEQGNCTRLTRAAKKRAAADENVGSRKRVVLGEIQNLPNVVVSGNPNPPKQKSESKTKVNMPLTMTSTTKKPTTTLVRSGSPGLENTQICEAYVFDIYGYLHKLEENPKRRPLPDYISKVQKDINADMRGILVDWLIEVSEEYKLVSDTLYLSISYIDRFLSVSQLNRQKLQLLGVSAMLVASKYEEITPPHVEDFCYITDNTYTKEEVVKMEAGLLKALNFELGNPTIKTFLRQDNPLLHFLEQNFLKLEVILSLYLILLCFLQNPNLELEFLAYYLAELSLLDYNCVKFTPSLVAASSSLSLQKCSGYNPVDLKDCVLLIHDLYLGRRGASLVAAREKYKQHKFKCVANMASPPEVPVAYFGDETKD | 370 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 8 | 54121845 | 54123773 | + | Bda030413.1 | Bda08g01363 | 12219 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Bda08g01363 | 370 | ProSitePatterns | Cyclins signature. | 130 | 161 | IPR006671 | - | |
| Bda08g01363 | 370 | Gene3D | - | 97 | 352 | - | - | |
| Bda08g01363 | 370 | SUPERFAMILY | Cyclin-like | 204 | 361 | IPR036915 | - | |
| Bda08g01363 | 370 | PIRSF | Cyclin_A_B_D_E | 4 | 362 | IPR039361 | - | |
| Bda08g01363 | 370 | Pfam | Cyclin, C-terminal domain | 265 | 355 | IPR004367 | - | |
| Bda08g01363 | 370 | SUPERFAMILY | Cyclin-like | 86 | 225 | IPR036915 | - | |
| Bda08g01363 | 370 | MobiDBLite | consensus disorder prediction | 1 | 23 | - | - | |
| Bda08g01363 | 370 | PANTHER | CYCLIN-A3-1-RELATED | 21 | 366 | - | - | |
| Bda08g01363 | 370 | CDD | CYCLIN | 129 | 218 | IPR013763 | - | |
| Bda08g01363 | 370 | Gene3D | - | 113 | 226 | - | - | |
| Bda08g01363 | 370 | SMART | Cyclin_C_2 | 255 | 356 | IPR004367 | - | |
| Bda08g01363 | 370 | Pfam | Cyclin, N-terminal domain | 97 | 225 | IPR006671 | - | |
| Bda08g01363 | 370 | SMART | cyclin_7 | 135 | 219 | IPR013763 | - | |
| Bda08g01363 | 370 | SMART | cyclin_7 | 257 | 325 | IPR013763 | - | |
| Bda08g01363 | 370 | PANTHER | CYCLINS | 21 | 366 | IPR039361 | - |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Bda03g00194 | Bda-Chr3:1558109 | Bda08g01363 | Bda-Chr8:54121845 | 6.99E-119 | dispersed | |
| Bda08g01363 | Bda-Chr8:54121845 | Bda13g01473 | Bda-Chr13:37627034 | 5.12E-64 | dispersed | |
| Bda01g00581 | Bda-Chr1:32830373 | Bda08g01363 | Bda-Chr8:54121845 | 3.51E-128 | wgd |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Bda08g01363 | K06627 | - | qsu:112025658 | 394.045 |