Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Bda08g01367 | ATGTTTTCTCTTGGCTTTTCTCCCATTTTTTTTACATGGAAAAATCACAAGTCAACCTCGCCTCATCATTTGGTCTTGCTACTTCCAAGCACTCACCTCATTTCCCACTTTCCTTTTCAATTTTCACCACCTTCTTCGTCTTCTCTGATCATTCTCCTATATAATTACCCTCCATTCTCTCTCGTCTTCTCCTCCTCCATGGGAGTAGGCATGAAGGTCCATCAATTCGCACGTGGGTTTTGGGAGCTCGAACCACCCTCCCTCTCCCTCGCCTGCAAGCGTCTCCGTCCGCTCGCTCCGAAGCTTCAAACCAACAATGACTCCACCATCTCCTCCTTCGATCTCAAGACCTTCATCAGACCAGACTCGGGCCCCAGACCAAACCCTTCTTCTTCCTTCTCCTCAGAAGACAAGAGAGATTTACTTCCCGTGGAGACGCTTCCTGGAGGGACAAGATGGAACCCGACTCAAGAACAGATTGGGATATTGGAGATGCTTTACAGGGGAGGAATGAGGACTCCTAATGCACAACAGATAGAACAAATCACAACCCAGCTAGGTAAATATGGCAAAATCGAAGGTAAAAATGTATTTTATTGGTTTCAGAACCATAAAGCCCGAGAAAGACAGAAGCAAAAGAGAAACAGTCTTGGTCTTTGCCATAGCCCAAGAACAGCTGTAGCAAATTCTAGGAGGGAGTAG | 702 | 46.44 | MFSLGFSPIFFTWKNHKSTSPHHLVLLLPSTHLISHFPFQFSPPSSSSLIILLYNYPPFSLVFSSSMGVGMKVHQFARGFWELEPPSLSLACKRLRPLAPKLQTNNDSTISSFDLKTFIRPDSGPRPNPSSSFSSEDKRDLLPVETLPGGTRWNPTQEQIGILEMLYRGGMRTPNAQQIEQITTQLGKYGKIEGKNVFYWFQNHKARERQKQKRNSLGLCHSPRTAVANSRRE | 233 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
8 | 54271883 | 54272756 | + | Bda030421.1 | Bda08g01367 | 12223 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Bda08g01367 | 233 | MobiDBLite | consensus disorder prediction | 210 | 233 | - | - | |
Bda08g01367 | 233 | SUPERFAMILY | Homeodomain-like | 149 | 216 | IPR009057 | - | |
Bda08g01367 | 233 | SMART | HOX_1 | 148 | 215 | IPR001356 | GO:0003677 | |
Bda08g01367 | 233 | CDD | homeodomain | 151 | 212 | IPR001356 | GO:0003677 | |
Bda08g01367 | 233 | Gene3D | - | 150 | 217 | - | - | |
Bda08g01367 | 233 | MobiDBLite | consensus disorder prediction | 117 | 150 | - | - | |
Bda08g01367 | 233 | ProSiteProfiles | 'Homeobox' domain profile. | 156 | 211 | IPR001356 | GO:0003677 | |
Bda08g01367 | 233 | Pfam | Homeodomain | 151 | 210 | IPR001356 | GO:0003677 | |
Bda08g01367 | 233 | PANTHER | WUSCHEL-RELATED HOMEOBOX 4 | 71 | 228 | IPR044186 | GO:0003700|GO:0010067|GO:0010087|GO:0051301 |
Event-related genes

Select | Gene_1 | Gene_2 | Event_name |
---|---|---|---|
Bda03g00190 | Bda08g01367 | CCT | |
Bda03g00190 | Bda08g01367 | ECH | |
Bda01g01597 | Bda08g01367 | BCT |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Bda01g01609 | Bda-Chr1:51961173 | Bda08g01367 | Bda-Chr8:54271883 | 1.63E-92 | dispersed | |
Bda02g00815 | Bda-Chr2:48762071 | Bda08g01367 | Bda-Chr8:54271883 | 3.78E-32 | dispersed | |
Bda08g01367 | Bda-Chr8:54271883 | Bda11g01802 | Bda-Chr11:53062380 | 6.89E-28 | dispersed |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
16332 | PF00046 | Homeodomain | 7.50E-19 | CL0123 | Bda | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Bda08g01367 | - | - | twl:120000509 | 261.151 |