Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Bda08g01371 | ATGTCGAACTATGCCTTCTTAAACGACCAGCTTTCGAAGAAAACCTCCATTTTCGGTTTACGCTTGTGGGTAGTTCTGGGTATTTGCGTCGGGGCAGCCATTGTTCTTGTTCTCTTCCTCATTTCGCTCTGGTTCACTTCCAGGCGAAATAACTCCTCCAAATCGAGGAACTCTCAGAGTCTCACCATCCCTAATGTCTCCAAGGAAATCCAGGAAATCCGGGTCGACCATTCTCGCAACACCACCCACCCCGACCCGAAGCTACAGCTTACGGCAAACCCAGACCCGTTGCCGGAGACGGAGGCGTTAGCCATAGTGGCTCAGCCGGAGGACGAGAATCAAGCGGGTTGGCGGCAAAGAATTCACATCGAGATTGGGAAGGACCACCGGATTTCGTACCCTGAGAGGGTCGGTGGGTCGTCCGGAGAGGCTAGGTCCGGCGACCAGGCGCTAATTGCGGTACCGGAGGTTTCGCATTTAGGTTGGGGACATTGGTATACTATCAGAGAGCTTGAATCCTCTACCAATGGATTTGCAGACGAGAATGTTATCGGCGAAGGTGGGTATGGAATTGTTTACCGTGGAGTGTTTGAAGACAATACTTGTGTTGCTGTCAAGAATTTGCTCAATAACAGAGGACAAGCGGAGAAGGAGTTTAAGGTTGAAGTTGAAGCAATTGGACGCGTTAGGCACAAGAATTTAGTGAGATTGTTGGGTTATTGCGCTGAAGGAGCTCATAGGATGCTTGTTTATGAATATGTTGATAATGGAAACTTAGAACAATGGCTCCATGGAGATGTCGGGCCGACCAGTCCTCTTACTTGGGACATTCGGATGAATATAATCCTCGGAACCGCAAAAGGATTGACATATCTACACGAGGGGCTCGAGCCGAAGGTTGTTCATCGCGATATTAAGTCTAGCAACATTTTGCTCGACAAGCAGTGGAATCCGAAGGTCTCTGACTTTGGCTTAGCAAAGCTTCTTGGCTCGGAGAGAAGTTATGTCACTACCCGGGTGATGGGAACGTTCGGATATGTAGCCCCTGAGTATGCTAGCACTGGAATGTTGAACGAAAGAAGCGATGTGTATAGTTTCGGGATTCTCATCATGGAAATCATCTCTGGACGGAATCCGGTCGACTATAGCCGTGCACCTGGCGAGGTGAATCTGGTCGAGTGGCTTAAAACAATGGTTACCAATCGGAACGCAGAGGGAGTTCTCGATCCAAAGTTGCCTGAGAAGCCTTCTTCACGAGCACTCAAACGAGCCCTTTTAGTAGCTTTACGGTGTGTGGATCCAAACGCTCAAAAGAGGCCGAAAATGGGGCACGTAATACACATGCTCGAGGCGGATGAGTTTCCTTTCAGAGACGACCGAAGAGCGGGACGAGAACTCGGGCTATCCCAGCGGGAAAATCTGAGGGATCGTTTGATGGACAAAAGAGTGAGCGAATCCGGAGATAGTAGTGGGTATGAAAGCGGAGCTCAGATTCATCAGCTTCTATGGAGAAAGCAAGAATCTGATGACAAGTAA | 1536 | 49.22 | MSNYAFLNDQLSKKTSIFGLRLWVVLGICVGAAIVLVLFLISLWFTSRRNNSSKSRNSQSLTIPNVSKEIQEIRVDHSRNTTHPDPKLQLTANPDPLPETEALAIVAQPEDENQAGWRQRIHIEIGKDHRISYPERVGGSSGEARSGDQALIAVPEVSHLGWGHWYTIRELESSTNGFADENVIGEGGYGIVYRGVFEDNTCVAVKNLLNNRGQAEKEFKVEVEAIGRVRHKNLVRLLGYCAEGAHRMLVYEYVDNGNLEQWLHGDVGPTSPLTWDIRMNIILGTAKGLTYLHEGLEPKVVHRDIKSSNILLDKQWNPKVSDFGLAKLLGSERSYVTTRVMGTFGYVAPEYASTGMLNERSDVYSFGILIMEIISGRNPVDYSRAPGEVNLVEWLKTMVTNRNAEGVLDPKLPEKPSSRALKRALLVALRCVDPNAQKRPKMGHVIHMLEADEFPFRDDRRAGRELGLSQRENLRDRLMDKRVSESGDSSGYESGAQIHQLLWRKQESDDK | 511 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
8 | 54296712 | 54298865 | + | Bda030425.1 | Bda08g01371 | 12227 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Bda08g01371 | 511 | ProSiteProfiles | Protein kinase domain profile. | 178 | 457 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Bda08g01371 | 511 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 300 | 312 | IPR008271 | GO:0004672|GO:0006468 | |
Bda08g01371 | 511 | PANTHER | OS01G0323000 PROTEIN | 5 | 496 | - | - | |
Bda08g01371 | 511 | PANTHER | RECEPTOR-LIKE KINASE PLANT | 5 | 496 | - | - | |
Bda08g01371 | 511 | Gene3D | Transferase(Phosphotransferase) domain 1 | 254 | 463 | - | - | |
Bda08g01371 | 511 | MobiDBLite | consensus disorder prediction | 474 | 511 | - | - | |
Bda08g01371 | 511 | SMART | serkin_6 | 178 | 456 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Bda08g01371 | 511 | CDD | STKc_IRAK | 184 | 450 | - | - | |
Bda08g01371 | 511 | Gene3D | Phosphorylase Kinase; domain 1 | 155 | 253 | - | - | |
Bda08g01371 | 511 | ProSitePatterns | Protein kinases ATP-binding region signature. | 184 | 206 | IPR017441 | GO:0005524 | |
Bda08g01371 | 511 | Pfam | Protein kinase domain | 179 | 447 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Bda08g01371 | 511 | SUPERFAMILY | Protein kinase-like (PK-like) | 159 | 450 | IPR011009 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Bda08g01371 | Bda-Chr8:54296712 | Bda13g00324 | Bda-Chr13:4119803 | 0 | dispersed | |
Bda08g01371 | Bda-Chr8:54296712 | Bda08g01098 | Bda-Chr8:24441036 | 0 | transposed |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
69782 | PF00069 | Pkinase | 5.30E-47 | CL0016 | Bda | PK |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Bda08g01371 | - | - | csv:101203008 | 857.44 |