Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda08g01371 ATGTCGAACTATGCCTTCTTAAACGACCAGCTTTCGAAGAAAACCTCCATTTTCGGTTTACGCTTGTGGGTAGTTCTGGGTATTTGCGTCGGGGCAGCCATTGTTCTTGTTCTCTTCCTCATTTCGCTCTGGTTCACTTCCAGGCGAAATAACTCCTCCAAATCGAGGAACTCTCAGAGTCTCACCATCCCTAATGTCTCCAAGGAAATCCAGGAAATCCGGGTCGACCATTCTCGCAACACCACCCACCCCGACCCGAAGCTACAGCTTACGGCAAACCCAGACCCGTTGCCGGAGACGGAGGCGTTAGCCATAGTGGCTCAGCCGGAGGACGAGAATCAAGCGGGTTGGCGGCAAAGAATTCACATCGAGATTGGGAAGGACCACCGGATTTCGTACCCTGAGAGGGTCGGTGGGTCGTCCGGAGAGGCTAGGTCCGGCGACCAGGCGCTAATTGCGGTACCGGAGGTTTCGCATTTAGGTTGGGGACATTGGTATACTATCAGAGAGCTTGAATCCTCTACCAATGGATTTGCAGACGAGAATGTTATCGGCGAAGGTGGGTATGGAATTGTTTACCGTGGAGTGTTTGAAGACAATACTTGTGTTGCTGTCAAGAATTTGCTCAATAACAGAGGACAAGCGGAGAAGGAGTTTAAGGTTGAAGTTGAAGCAATTGGACGCGTTAGGCACAAGAATTTAGTGAGATTGTTGGGTTATTGCGCTGAAGGAGCTCATAGGATGCTTGTTTATGAATATGTTGATAATGGAAACTTAGAACAATGGCTCCATGGAGATGTCGGGCCGACCAGTCCTCTTACTTGGGACATTCGGATGAATATAATCCTCGGAACCGCAAAAGGATTGACATATCTACACGAGGGGCTCGAGCCGAAGGTTGTTCATCGCGATATTAAGTCTAGCAACATTTTGCTCGACAAGCAGTGGAATCCGAAGGTCTCTGACTTTGGCTTAGCAAAGCTTCTTGGCTCGGAGAGAAGTTATGTCACTACCCGGGTGATGGGAACGTTCGGATATGTAGCCCCTGAGTATGCTAGCACTGGAATGTTGAACGAAAGAAGCGATGTGTATAGTTTCGGGATTCTCATCATGGAAATCATCTCTGGACGGAATCCGGTCGACTATAGCCGTGCACCTGGCGAGGTGAATCTGGTCGAGTGGCTTAAAACAATGGTTACCAATCGGAACGCAGAGGGAGTTCTCGATCCAAAGTTGCCTGAGAAGCCTTCTTCACGAGCACTCAAACGAGCCCTTTTAGTAGCTTTACGGTGTGTGGATCCAAACGCTCAAAAGAGGCCGAAAATGGGGCACGTAATACACATGCTCGAGGCGGATGAGTTTCCTTTCAGAGACGACCGAAGAGCGGGACGAGAACTCGGGCTATCCCAGCGGGAAAATCTGAGGGATCGTTTGATGGACAAAAGAGTGAGCGAATCCGGAGATAGTAGTGGGTATGAAAGCGGAGCTCAGATTCATCAGCTTCTATGGAGAAAGCAAGAATCTGATGACAAGTAA 1536 49.22 MSNYAFLNDQLSKKTSIFGLRLWVVLGICVGAAIVLVLFLISLWFTSRRNNSSKSRNSQSLTIPNVSKEIQEIRVDHSRNTTHPDPKLQLTANPDPLPETEALAIVAQPEDENQAGWRQRIHIEIGKDHRISYPERVGGSSGEARSGDQALIAVPEVSHLGWGHWYTIRELESSTNGFADENVIGEGGYGIVYRGVFEDNTCVAVKNLLNNRGQAEKEFKVEVEAIGRVRHKNLVRLLGYCAEGAHRMLVYEYVDNGNLEQWLHGDVGPTSPLTWDIRMNIILGTAKGLTYLHEGLEPKVVHRDIKSSNILLDKQWNPKVSDFGLAKLLGSERSYVTTRVMGTFGYVAPEYASTGMLNERSDVYSFGILIMEIISGRNPVDYSRAPGEVNLVEWLKTMVTNRNAEGVLDPKLPEKPSSRALKRALLVALRCVDPNAQKRPKMGHVIHMLEADEFPFRDDRRAGRELGLSQRENLRDRLMDKRVSESGDSSGYESGAQIHQLLWRKQESDDK 511
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 54296712 54298865 + Bda030425.1 Bda08g01371 12227
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda08g01371 511 ProSiteProfiles Protein kinase domain profile. 178 457 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bda08g01371 511 ProSitePatterns Serine/Threonine protein kinases active-site signature. 300 312 IPR008271 GO:0004672|GO:0006468
Bda08g01371 511 PANTHER OS01G0323000 PROTEIN 5 496 - -
Bda08g01371 511 PANTHER RECEPTOR-LIKE KINASE PLANT 5 496 - -
Bda08g01371 511 Gene3D Transferase(Phosphotransferase) domain 1 254 463 - -
Bda08g01371 511 MobiDBLite consensus disorder prediction 474 511 - -
Bda08g01371 511 SMART serkin_6 178 456 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bda08g01371 511 CDD STKc_IRAK 184 450 - -
Bda08g01371 511 Gene3D Phosphorylase Kinase; domain 1 155 253 - -
Bda08g01371 511 ProSitePatterns Protein kinases ATP-binding region signature. 184 206 IPR017441 GO:0005524
Bda08g01371 511 Pfam Protein kinase domain 179 447 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bda08g01371 511 SUPERFAMILY Protein kinase-like (PK-like) 159 450 IPR011009 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda08g01371 Bda-Chr8:54296712 Bda13g00324 Bda-Chr13:4119803 0 dispersed
Bda08g01371 Bda-Chr8:54296712 Bda08g01098 Bda-Chr8:24441036 0 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
69782 PF00069 Pkinase 5.30E-47 CL0016 Bda PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda08g01371 - - csv:101203008 857.44