Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda08g01381 ATGGAGGACGCTTACGCCAGATCTGTTAGTGAGGTATTGGATTTCTTTGGGGTGGACCCGTCAAGAGGACTTACTGACGCTCAGGTTGCTCAACATGCAAGAATTTTTGGTAAAAATGTACTACCTGAAGAGAGAAGGGCTCCATTTTGGAAACTTGTACTAAAACAGTTCGATGATTTACTTGTTAAGATATTAATTGCTGCGGCACTTGTTTCTTTTCTCTTGGCATTGATTAATGGAGAAACTGGATTAACTGCTTTTTTGGAGCCTTCTGTTATTCTGTTGATATTGGCTGCAAATGCAGCTGTTGGTGTAATCACAGAAAGTAACGCTGAAAAAGCTCTCGAGGAGCTACGGGCCTATCAAGCCGATATTGCAACTGTTATGCGAAATGGTTGCTTTTCCATACTCCCAGCAACAGATCTCGTTCCAGGTGATATCGTTGATGTTTCAGTGGGATGCAAAATTCCAGCTGATATGCGGATGATTGAAATGCTAAGTAATCAATTACGCGTAGATCAGGCAATTCTTACAGGTGAGAGCTGCTCTGTAGAAAAAGAGCTTGAACCCACAACTGCAGCAAATGCTGTATACCAAGACAAGACCAATATTCTTTTCTCGGGTACAGTTGTAGTTGCTGGTAGGGCAAGGGCTACGGTTGTAGGAGTGGGGCCTAATACTGCCATGGGCAGCATACGAGATTCCATGTTACAAACAGCAGATGAGGTGACACCATTGAAGAAGAAGCTAGATGAGTTTGGTACTTTTTTAGCCAAGGTCATTGCTGGAATATGTCTACTGGTATGGATAGTAAACATTGGTCACTTTCATGACCCTTCTCATGGAGGGTTCATACGTGGTGCAATTCATTACTTTAAGATTGCAGTTGCCCTTGCAGTTGCAGCAATACCTGAAGGACTTCCTGCTGTTGTGACAACGTGTTTGGCTCTTGGAACCAAACGAATGGCTCGGATGAATGCAATTGTAAGATCTTTGCCATCCGTGGAGACATTAGGCTGTACTACTGTAATATGCAGTGACAAAACTGGAACTTTGACTACCAATATGATATCTGTTTCCAAGCTATGTGTGGTTCATTCTGTTATGCGGGGCCCTTTAATTGATGAATACAGCATCAGTGGTACCACATATGCACCTGAAGGCATTATATATGACAGCACAGGGGTTCAGGTGGAATTTCCAGCTCAGTTATATTGTCTTCTACATATGGCTATGTGCTCAGCCCTGTGCAATGAGTCTGTATTGCAATATAATCCTGACAAGGGTAACTATGAAAAGATTGGCGAATCTACTGAAGTGGCCCTACGTGTTCTAGCAGAGAAGGTGGGTCTTCCTGGTTTTGACTCAATGCCTTCATCTTTGAATATGCTAAGCAAGCATGAACGAGCTTCGTACTGCAACCACCATTGGGAAAGTCAATTCAAAAAGATTTCAATATTGGACTTTACTCGTGATCGTAAAATGATGAGTGTTCTATGTAGCAGAAATCAGCTACAGATATTGTTTGCAAAAGGTGCTCCTGAGAGTATCATTTCTAGATGTTCTTATATACTTTGCAATGAAGATGGTTCCATTTCACCCCTAACTTCCAATATTCAAGCTGAGCTAGAGTCAAAGTTTCAAAGTTTTGCAGGAAAAGAAACTCTAAGATGCCTGGCTTTGGCTTTGAAGTGGATGCCTACGGATCAACAGAGTTTGTCTATTGATGACGAGAAAGAACTTACATTCATTGGGTTGGTTGGAATGCTTGATCCACCGAGAGAGGAAGTCAGAAGTGCTATGCTTTCTTGCATGACTGCTGGAATACGTGTTATAGTGGTCACCGGTGATAACAAGTCAACAGCTGAATCCATCTGCCGCCAGATTGGTGGTCCATTTGATCATATCAATCTTCCAGGACATTCTTATACTGCTTCTGAGTTCGAAGAACTACCTTCATTGCAGCAAACTGTGGCAGTGCAACAAATGACGCTATTCAGCAGGGTTGAACCTTCTCATAAGAGGATGCTGGTTGAGGCTTTACAGCATCAAAATGAAGTGGTTGCAATGACTGGTGATGGCGTCAATGATGCTCCTGCACTAAAAAAAGCTGACATAGGGATCGCCATGGGTTCAGGAACAGCAGTTGCCAAGAGTGCTTCAGATATGGTTTTGGCAGATGACAATTTTGCTACGATTGTTGCGGCTGTTGCTGAGGGACGGGCTATATATAATAACACGAAGCAGTTTATCAGATACATGATCTCATCAAACATTGGTGAAGTGGTTTGTATATTTGTGGCAGCTGTACTTGGAATTCCAGAAACCCTTGCTCCTGTTCAGCTTCTCTGGGTTAATTTGGTCACTGATGGATTACCTGCCACTGCAATTGGATTTAACAAGCAAGACTCTGATGTAATGAAGGTTAAACCACGTAAGGTGAATGAAGCTGTTGTTACTGGGTGGCTGTTCTTTCGTTACTTGGTTATTGGAGCCTATGTCGGCTTTGCCACTATTGCCGGTTTCATTTGGTGGTTTGTTTACTCTGATAGTGGTCCTCAACTACCATATAGTGAATTGATGAATTTTGACAGTTGTTCAGCGAGGGAGACGAGTTACCCATGCAGTGTATTCGATGATAAGCGTCCATCAACTGTTTCAATGACTGTCCTTGTTGTTGTTGAAATGTTTAATGCTTTGAATAATTTGAGTGAAAACCAATCTATCATTGTCATCCCTCCCTGGAGTAATTTATGGCTTGTAGCTTCAATTGTCCTTACAATGATCCTTCACGTACTCATTCTTTATGTACAACCGCTTTCTGTTCTTTTCTCTGTAACCCCACTATCTTGGGCTGAGTGGACTGTTGTCTTGTATCTTTCATTTCCTGTTGTAATCATTGACGAAGTGTTGAAGTTCTTCTCTAGACATTCCAATGGAGTAAGATTCACTATCAGATTCAGAAGGCACGACTTACTCCCGAAGAAAGAACTTCACGACAAGTAA 3006 42.12 MEDAYARSVSEVLDFFGVDPSRGLTDAQVAQHARIFGKNVLPEERRAPFWKLVLKQFDDLLVKILIAAALVSFLLALINGETGLTAFLEPSVILLILAANAAVGVITESNAEKALEELRAYQADIATVMRNGCFSILPATDLVPGDIVDVSVGCKIPADMRMIEMLSNQLRVDQAILTGESCSVEKELEPTTAANAVYQDKTNILFSGTVVVAGRARATVVGVGPNTAMGSIRDSMLQTADEVTPLKKKLDEFGTFLAKVIAGICLLVWIVNIGHFHDPSHGGFIRGAIHYFKIAVALAVAAIPEGLPAVVTTCLALGTKRMARMNAIVRSLPSVETLGCTTVICSDKTGTLTTNMISVSKLCVVHSVMRGPLIDEYSISGTTYAPEGIIYDSTGVQVEFPAQLYCLLHMAMCSALCNESVLQYNPDKGNYEKIGESTEVALRVLAEKVGLPGFDSMPSSLNMLSKHERASYCNHHWESQFKKISILDFTRDRKMMSVLCSRNQLQILFAKGAPESIISRCSYILCNEDGSISPLTSNIQAELESKFQSFAGKETLRCLALALKWMPTDQQSLSIDDEKELTFIGLVGMLDPPREEVRSAMLSCMTAGIRVIVVTGDNKSTAESICRQIGGPFDHINLPGHSYTASEFEELPSLQQTVAVQQMTLFSRVEPSHKRMLVEALQHQNEVVAMTGDGVNDAPALKKADIGIAMGSGTAVAKSASDMVLADDNFATIVAAVAEGRAIYNNTKQFIRYMISSNIGEVVCIFVAAVLGIPETLAPVQLLWVNLVTDGLPATAIGFNKQDSDVMKVKPRKVNEAVVTGWLFFRYLVIGAYVGFATIAGFIWWFVYSDSGPQLPYSELMNFDSCSARETSYPCSVFDDKRPSTVSMTVLVVVEMFNALNNLSENQSIIVIPPWSNLWLVASIVLTMILHVLILYVQPLSVLFSVTPLSWAEWTVVLYLSFPVVIIDEVLKFFSRHSNGVRFTIRFRRHDLLPKKELHDK 1001
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 54563505 54602581 + Bda030438.2 Bda08g01381 12237
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda08g01381 1001 PANTHER CALCIUM-TRANSPORTING ATPASE 2 981 - -
Bda08g01381 1001 PRINTS H+-transporting ATPase (proton pump) signature 663 679 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Bda08g01381 1001 PRINTS H+-transporting ATPase (proton pump) signature 691 707 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Bda08g01381 1001 PRINTS H+-transporting ATPase (proton pump) signature 722 747 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Bda08g01381 1001 Pfam E1-E2 ATPase 122 324 - -
Bda08g01381 1001 Gene3D - 355 592 IPR023299 GO:0000166
Bda08g01381 1001 Gene3D - 55 976 - -
Bda08g01381 1001 Coils Coil 111 131 - -
Bda08g01381 1001 ProSitePatterns E1-E2 ATPases phosphorylation site. 347 353 IPR018303 -
Bda08g01381 1001 SUPERFAMILY HAD-like 343 794 IPR036412 -
Bda08g01381 1001 Pfam Cation transport ATPase (P-type) 415 524 - -
Bda08g01381 1001 SFLD C1.7: P-type atpase like 326 743 - -
Bda08g01381 1001 SMART Cation_ATPase_N_a_2 3 77 IPR004014 -
Bda08g01381 1001 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 352 589 IPR023299 GO:0000166
Bda08g01381 1001 SFLD p-type atpase 326 743 IPR044492 -
Bda08g01381 1001 Pfam haloacid dehalogenase-like hydrolase 584 705 - -
Bda08g01381 1001 Pfam Cation transporter/ATPase, N-terminus 5 72 IPR004014 -
Bda08g01381 1001 PANTHER SARCOPLASMIC/ENDOPLASMIC RETICULUM CALCIUM ATPASE 3 2 981 - -
Bda08g01381 1001 CDD P-type_ATPase_SERCA 5 976 - -
Bda08g01381 1001 Gene3D - 342 735 IPR023214 -
Bda08g01381 1001 SUPERFAMILY Calcium ATPase, transduction domain A 124 235 IPR008250 -
Bda08g01381 1001 Pfam Cation transporting ATPase, C-terminus 775 974 IPR006068 -
Bda08g01381 1001 Gene3D - 22 237 - -
Bda08g01381 1001 TIGRFAM ATPase-IIA1_Ca: calcium-translocating P-type ATPase, SERCA-type 53 846 IPR005782 GO:0005388|GO:0006816|GO:0016021
Bda08g01381 1001 PRINTS P-type cation-transporting ATPase superfamily signature 585 596 - -
Bda08g01381 1001 PRINTS P-type cation-transporting ATPase superfamily signature 173 187 - -
Bda08g01381 1001 PRINTS P-type cation-transporting ATPase superfamily signature 691 710 - -
Bda08g01381 1001 PRINTS P-type cation-transporting ATPase superfamily signature 714 726 - -
Bda08g01381 1001 PRINTS P-type cation-transporting ATPase superfamily signature 345 359 - -
Bda08g01381 1001 PRINTS P-type cation-transporting ATPase superfamily signature 607 617 - -
Bda08g01381 1001 SUPERFAMILY Calcium ATPase, transmembrane domain M 1 977 IPR023298 -
Bda08g01381 1001 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 234 366 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Bda08g01381 1001 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 661 779 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda08g01381 Bda-Chr8:54563505 Bda09g01488 Bda-Chr9:46698681 3.35E-158 dispersed
Bda08g01381 Bda-Chr8:54563505 Bda02g00797 Bda-Chr2:48657146 0 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda08g01381 K05853 - mnt:21387511 1737.62