Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda09g00021 ATGGATTTCTCTGTGATTTTCTTTCTGGGTTTAATGTTTTCGATGAGCAATGCCGACCCAGTTGAAGATAAGCAAGCTTTGCTTGAGTTCATGACCAATCTCCCTCACTCTCGCTACCTCAATTGGAACGACAACTCTCCGGTTTGCAACAACTGGACTGGTATAACTTGCAGCAAGGATAATGCGCGCGTCATAGCCGTCCGTTTGCCTGGCGTCGGTTTTGACGGTCCTATTCCGGCCAACACTCTTAGCCGACTCTCGGCTTTGCAAACTTTGAGTCTCAGATCTAATGGTATAACCGGAAACTTCCCTTCTGATTTTTCTAATCTCAGAAACTTGTCCTTTCTTTATCTTCAATTCAATAACTTCTCCGGCCCGTTGCCGTTTGATTTCTCTGTCTGGAGGAACCTCACATTCATTAATCTATCAAATAATGGCTTCAATGGAACTATTCCCTCGTCGCTTTCTAATTTGACGCTGCTCAATGGTTTGAATCTCGCGAACAACTCATTTTCTGGAGAGATTCCGGACCTCAATTCGCTCAGATTACAAACGCTTGATTTGTCTAACAATCAACTGATGGGTGATGTTCCTCAGTCACTCCATAGGTTCCCCAGGTCAGTGTTTGTCGGAAATAACATCTCTTTTCGAAGTTTTGCGCCAGATCTTTCTCCAGTTTCTCCGCTTCCTTCTGAACCATACGAGAAACCACGGAACAGCAGCGGTAAGCTCGGCGAAAAGGCATTGCTAGCAATTATAGTTGCCGGAGCTCTTCTGGGGCTTTTAGCATTTGGATTTCTGATACTTGTTTGCTGCTCCAGAAGGAAAAAGAGAGATGAGTTCGCAGGGAATTTGCAGAAAGGAGAAATGTCGCCGGAAAAAGTGATGGCGAGGAGCCAAGATGCGAATAACAGGTTGGTGTTTTTCGAGGGGTGTAACTATGCATTTGACTTGGAAGATTTGCTAAGAGCTTCTGCAGAGATTCTGGGAAAGGGGACATTTGGTACTGCTTACAGGGCCATTCTTGAGGATGCAACCAGAGTTGTGGTGAAGAGATTGAAGGAAGTAAGTGTGGGGAAGCGAGAGTTTGAACAGCAGATGGAGATTGTTGGAAGCATAAGGCATGAGAATGTGGTTGAGTTGAAGGCTTATTATTACTCCAAGGATGAGAAGCTCATGGTCTATGAATATTACACTCAAGGCAGTGTCTCTGCAATGCTGCATGGTAAAAGAGGGGAGGATATAGTCCCTTTGGACTGGAATTCTCGGCTGCGGATAGCCGTCGGTGCTGCAAGAGGTATATCTCGGATTCACCAAGAGAATGGAGGGAAGCTTGTACATGGCAACGTCAAGTCTTCGAATATCTTTCTCAATTCTAGACAATACGGTTGTGTTTCTGATCTCGGATTGGCAACTTTAACGACCTCATTGTCCCCTCCAATATCTCGCGCTGCCGGCTACCGTGCCCCTGAGGTGACGGATACTAGAAAAGCAACGCAATCCTCCGATGTTTTCAGCTTTGGTGTGGTGCTTCTAGAGCTACTTACAGGGAAATCTCCTATTCATACTACTGGAGGGGATGAGATTGTTCACTTAGTGAGATGGGTTCATTCGGTTGTGAGAGAGGAGTGGACGGCGGAAGTGTTCGACGTGGAGCTCATGAAGTTTCCCAACATAGAGGAGGAGATGGTCGAGATGTTGCAAATAGCACTGTCGTGTGTCGGGAGGATGCCGGATCGGAGACCAAAAATGGCGGATGTAGTGAAAATGATTGAAAATGTCCGACAGTTCGATAATGAAAATCCATCGCCTTCCATACCAGTAAGCAGGACGGAACCTTCTACGTCTTAG 1851 46.03 MDFSVIFFLGLMFSMSNADPVEDKQALLEFMTNLPHSRYLNWNDNSPVCNNWTGITCSKDNARVIAVRLPGVGFDGPIPANTLSRLSALQTLSLRSNGITGNFPSDFSNLRNLSFLYLQFNNFSGPLPFDFSVWRNLTFINLSNNGFNGTIPSSLSNLTLLNGLNLANNSFSGEIPDLNSLRLQTLDLSNNQLMGDVPQSLHRFPRSVFVGNNISFRSFAPDLSPVSPLPSEPYEKPRNSSGKLGEKALLAIIVAGALLGLLAFGFLILVCCSRRKKRDEFAGNLQKGEMSPEKVMARSQDANNRLVFFEGCNYAFDLEDLLRASAEILGKGTFGTAYRAILEDATRVVVKRLKEVSVGKREFEQQMEIVGSIRHENVVELKAYYYSKDEKLMVYEYYTQGSVSAMLHGKRGEDIVPLDWNSRLRIAVGAARGISRIHQENGGKLVHGNVKSSNIFLNSRQYGCVSDLGLATLTTSLSPPISRAAGYRAPEVTDTRKATQSSDVFSFGVVLLELLTGKSPIHTTGGDEIVHLVRWVHSVVREEWTAEVFDVELMKFPNIEEEMVEMLQIALSCVGRMPDRRPKMADVVKMIENVRQFDNENPSPSIPVSRTEPSTS 616
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 334378 336384 - Bda030539.1 Bda09g00021 12271
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda09g00021 616 PANTHER OS05G0588300 PROTEIN 16 602 - -
Bda09g00021 616 ProSitePatterns Protein kinases ATP-binding region signature. 329 360 IPR017441 GO:0005524
Bda09g00021 616 Gene3D Ribonuclease Inhibitor 22 131 IPR032675 -
Bda09g00021 616 SUPERFAMILY L domain-like 32 205 - -
Bda09g00021 616 Gene3D Transferase(Phosphotransferase) domain 1 399 605 - -
Bda09g00021 616 Gene3D Phosphorylase Kinase; domain 1 289 397 - -
Bda09g00021 616 Pfam Protein kinase domain 326 589 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bda09g00021 616 Gene3D Ribonuclease Inhibitor 132 231 IPR032675 -
Bda09g00021 616 Pfam Leucine rich repeat N-terminal domain 22 58 IPR013210 -
Bda09g00021 616 ProSiteProfiles Protein kinase domain profile. 323 594 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bda09g00021 616 PANTHER PROTEIN, PUTATIVE-RELATED 16 602 - -
Bda09g00021 616 SUPERFAMILY Protein kinase-like (PK-like) 327 611 IPR011009 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda01g00068 Bda-Chr1:11807725 Bda09g00021 Bda-Chr9:334378 0 dispersed
Bda09g00021 Bda-Chr9:334378 Bda11g00126 Bda-Chr11:1705789 0 dispersed
Bda09g00021 Bda-Chr9:334378 Bda14g01104 Bda-Chr14:9917092 0 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
69783 PF00069 Pkinase 3.40E-34 CL0016 Bda PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda09g00021 - - zju:107430123 947.962