Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda09g00041 ATTCACAAAGTGCCACACATTTTCAGCAACAATTTTTGCCCTTTCGCACAAACTAACAAACCCGCCGTGTTTGGCATAAGTGGAATGACATGTTCACCATGTGCAGGCTCCATCGAAAGGTCGATCAATCGTCTTCCAGGAATTCTCGATGCATCGGTCGATTTCTCGAACGATAGAGCTCAGATCCATTACAACCCCGGCTTTGTTAATGAGGAGAGCATTCGTGGGGCTATTGAGGATGTTGGGTTCGAAGCAAGATTGTTATATGAACAAGACATCAGTAAAACCACCCAGAAATGTCAAATACGGATTGAAGGAATGACCTGCACTGCCTGTTCGACAGCAGTTGAGCAAAACTTACAAGCTATCAATGGCGTCGAAAGAGCAGCAGTTGCATTAGCAATAGAGGAAGCTGAAATTCACTACAACCCAGATATCATAAAGCCGGAAACTCTTCTTCAGTATATTCAAGATTCTGGATTTGCACCCACACTCCTCGCCATTGGAGATCGCTCGAGCAAAATAGAACTTAAAATTGAAGGCCTGAGAACAGGTGCTTCAATGGCGATAATTGAAAATTCTCTCAAATCAGTTGTTGGAATAGAAGACACAGTTGCCGACCCTACGCTCGGGAAAATCTCCATTTCTTACAGACCAGACATGGTGGGACCGAGGACATTCATTGAGGTCATTGAATCGATCAAATCTGGAGCTTTCAAAGCAACCATTTTTCCTCAAGAAAGAAGAGATTCTTACAGGGAGAAAGAAATCAAACAGTATTTTCGATCTTTCTTATGGAGCTTTGCTTTTTCGATTCCTGTTTTTCTAACTTCCATGGTGTTCATGTACATTCCCACAATCGAACGAGCACTGGATACTAAAGTATGGAATATGATGAACATAGGAATGATTGTGAGGTGGGAGCTAACAACGCCAGTGCAGTTCTTCATCGGCCGGAGATTCTACGTCGGAGCCTATAAATCTCTCCGACATGGGTCGGCTAATATGGATGTTTTAGTTGCATTAGGAACAAATGCAGCCTATTTTTACTCAGTCTATATCATAATAAGATCTGTTTCTTCCCCACATTTTGAGGGCACAGATTTTTTTGAAACCAGCACAATGCTGATTTCATTTATTCTTCTGGGGAAATACTTGGAGGTTTTGGCGAAAGGGAAGACGTCGGAAGCCATAGCCAAGCTTATGAACTTAACTCCAGAAACAGCGACTTTGTTGAGTCTGGATGAGGGTGGAAACGTGTTGAGTGAGAGAGAGATTGATAGCCGTCTGATTCAGAAGAATGATGTGATTAAGGTGGTTGCAGGTGAGAAAGTGGGGTCAGATGGGTACGTTGTATGGGGAGAGAGCCGCGTGAACGAGAGTATGATAACAGGAGAAGCAAAGCCAGTGGGGAAGAAGAAAGGCGATGCAGTGATTGGAGGAACAGTGAATGAAAATGGAGTTCTTCATGTTAGGGCAACGAGAGTTGGATCAGATAGTGCACTTTCTCAGATTGTTAGACTCGTTGAATCGGCCCAGATGGCTAAAGCTCCTGTTCAGAAATTTGCTGATACAATTTCCAAGTTCTTTGTGCCTATTGTGATTGTGCTTTCACTTTTGACATGGGTAACCTGGTATTTAACTGCAAAGTTCAATCTGTATCCAAAATCATGGATACCAGCTTCATTGGATAGCTTTGAGCTTGCTCTTCAGTTTGGAATATCAGTGATGGTCATAGCCTGCCCCTGTGCATTAGGCCTTGCAACTCCTACAGCCGTCATGGTCGGCACGGGTGTCGGTGCCACTCAAGGAGTGCTCATCAAAGGAGGTCTGGCCTTAGAATCCACCCACAAGGTGAACTGCATAGTGTTCGACAAGACTGGAACTCTAACAGTAGGGAAGCCAATGGTTGTCAGAGAAAAGCTGTTTAAAGATATGAAACTTGATCATCTACTTATCCTCGTTGGTGCAACTGAGGTGAACAGTGAGCACCCTGTTGGCAAAGCCATTGTTGATTATGCAAAGAATTGTAGAGATGGGGGGGAAGAACATAGTCCTTCCTGGCCAGAAGCTAAGAACTTTATCACCATTGCTGGCCATGGAGTTAAAGCCACAGTAAAAAACAAGGAAATCATTGTGGGTAACAGGAGCTTGATGATCGACCACAACATAGCCATTCCAATTGAAGCTCAAAATTTTCTAGCTGAAGCAGAAAGTATGGCTCAAACTGGAATCATCGTAGCCATTGATGGGGAGGTCGAAGGAGCTTTCGCCATTTCTGACACGCTAAAACCAGGCGCAAAAGAAGTCATTTCTATTCTAAACTCCATGAAAGTGAAAGTCATCGCCGAGGCTAAACCTGAGCAGAAAGCTGAGAAAATTAAGGAGTTGCAGGCAGCAGGCCACAAAGTAGCAATGGTGGGAGATGGAATAAACGACTCTCCAGCTCTAGCAGCGGCTGACGTCGGTATAGCGATAGGAGCCGGAACCGACGTAGCCATTGAAGCTGCTGACATTGTTCTGATAAAAAGCAACTTAGAAGATGTAATAACAGCCATCGATCTTTCCAGAAAAACCTTCTCTCGAATTCGTTTGAACTACATTTGGGCTCTAGTTTATAACCTCCTCGGCATTCCAATAGCAGCCGGATGCCTGTTTCCGGCGATCAGATTAAGATTACCTCCGTGGGTTGCCGGAGCTGCCATGGCTGCTTCTTCTGTCAGCGTCGTTTGTAGCTCTCTCGTTTTGAAATTTTACAAGAGACCTAAGAAGCTGGAGATGAACAGTCTTCAGATGAATGGAATCACCATTGAATGA 2817 44.2 IHKVPHIFSNNFCPFAQTNKPAVFGISGMTCSPCAGSIERSINRLPGILDASVDFSNDRAQIHYNPGFVNEESIRGAIEDVGFEARLLYEQDISKTTQKCQIRIEGMTCTACSTAVEQNLQAINGVERAAVALAIEEAEIHYNPDIIKPETLLQYIQDSGFAPTLLAIGDRSSKIELKIEGLRTGASMAIIENSLKSVVGIEDTVADPTLGKISISYRPDMVGPRTFIEVIESIKSGAFKATIFPQERRDSYREKEIKQYFRSFLWSFAFSIPVFLTSMVFMYIPTIERALDTKVWNMMNIGMIVRWELTTPVQFFIGRRFYVGAYKSLRHGSANMDVLVALGTNAAYFYSVYIIIRSVSSPHFEGTDFFETSTMLISFILLGKYLEVLAKGKTSEAIAKLMNLTPETATLLSLDEGGNVLSEREIDSRLIQKNDVIKVVAGEKVGSDGYVVWGESRVNESMITGEAKPVGKKKGDAVIGGTVNENGVLHVRATRVGSDSALSQIVRLVESAQMAKAPVQKFADTISKFFVPIVIVLSLLTWVTWYLTAKFNLYPKSWIPASLDSFELALQFGISVMVIACPCALGLATPTAVMVGTGVGATQGVLIKGGLALESTHKVNCIVFDKTGTLTVGKPMVVREKLFKDMKLDHLLILVGATEVNSEHPVGKAIVDYAKNCRDGGEEHSPSWPEAKNFITIAGHGVKATVKNKEIIVGNRSLMIDHNIAIPIEAQNFLAEAESMAQTGIIVAIDGEVEGAFAISDTLKPGAKEVISILNSMKVKVIAEAKPEQKAEKIKELQAAGHKVAMVGDGINDSPALAAADVGIAIGAGTDVAIEAADIVLIKSNLEDVITAIDLSRKTFSRIRLNYIWALVYNLLGIPIAAGCLFPAIRLRLPPWVAGAAMAASSVSVVCSSLVLKFYKRPKKLEMNSLQMNGITIE 938
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 615048 620488 + Bda030563.1 Bda09g00041 12291
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda09g00041 938 Pfam haloacid dehalogenase-like hydrolase 794 849 - -
Bda09g00041 938 Gene3D - 590 864 IPR023214 -
Bda09g00041 938 CDD P-type_ATPase_Cu-like 262 903 - -
Bda09g00041 938 Pfam haloacid dehalogenase-like hydrolase 619 782 - -
Bda09g00041 938 PRINTS Copper-transporting ATPase 1 signature 21 46 - -
Bda09g00041 938 PRINTS Copper-transporting ATPase 1 signature 47 70 - -
Bda09g00041 938 PRINTS Copper-transporting ATPase 1 signature 122 143 - -
Bda09g00041 938 PRINTS Copper-transporting ATPase 1 signature 76 96 - -
Bda09g00041 938 SUPERFAMILY HMA, heavy metal-associated domain 169 238 IPR036163 GO:0046872
Bda09g00041 938 SUPERFAMILY Calcium ATPase, transmembrane domain M 368 882 IPR023298 -
Bda09g00041 938 ProSiteProfiles Heavy-metal-associated domain profile. 21 87 IPR006121 GO:0046872
Bda09g00041 938 Gene3D - 711 762 IPR023299 GO:0000166
Bda09g00041 938 Gene3D - 630 710 IPR023299 GO:0000166
Bda09g00041 938 SUPERFAMILY HMA, heavy metal-associated domain 96 167 IPR036163 GO:0046872
Bda09g00041 938 PANTHER ATP7, ISOFORM B 780 927 - -
Bda09g00041 938 CDD HMA 26 86 IPR006121 GO:0046872
Bda09g00041 938 Gene3D - 95 167 - -
Bda09g00041 938 Gene3D - 171 244 - -
Bda09g00041 938 Pfam E1-E2 ATPase 404 601 - -
Bda09g00041 938 PANTHER COPPER-TRANSPORTING ATPASE HMA5-RELATED 780 927 - -
Bda09g00041 938 PRINTS P-type cation-transporting ATPase superfamily signature 459 473 - -
Bda09g00041 938 PRINTS P-type cation-transporting ATPase superfamily signature 830 842 - -
Bda09g00041 938 PRINTS P-type cation-transporting ATPase superfamily signature 807 826 - -
Bda09g00041 938 PRINTS P-type cation-transporting ATPase superfamily signature 623 637 - -
Bda09g00041 938 Pfam Heavy-metal-associated domain 24 84 IPR006121 GO:0046872
Bda09g00041 938 Pfam Heavy-metal-associated domain 102 161 IPR006121 GO:0046872
Bda09g00041 938 SUPERFAMILY HMA, heavy metal-associated domain 20 88 IPR036163 GO:0046872
Bda09g00041 938 CDD HMA 101 164 IPR006121 GO:0046872
Bda09g00041 938 ProSiteProfiles Heavy-metal-associated domain profile. 99 165 IPR006121 GO:0046872
Bda09g00041 938 PANTHER ATP7, ISOFORM B 17 782 - -
Bda09g00041 938 ProSitePatterns Heavy-metal-associated domain. 104 133 IPR017969 GO:0046872
Bda09g00041 938 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 376 886 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Bda09g00041 938 SUPERFAMILY Calcium ATPase, transduction domain A 423 509 IPR008250 -
Bda09g00041 938 TIGRFAM ATPase-IB_hvy: heavy metal translocating P-type ATPase 336 780 IPR027256 GO:0006812|GO:0016021|GO:0019829
Bda09g00041 938 Gene3D - 391 513 - -
Bda09g00041 938 ProSiteProfiles Heavy-metal-associated domain profile. 174 243 IPR006121 GO:0046872
Bda09g00041 938 SUPERFAMILY HAD-like 622 913 IPR036412 -
Bda09g00041 938 ProSitePatterns E1-E2 ATPases phosphorylation site. 625 631 IPR018303 -
Bda09g00041 938 Gene3D - 20 90 - -
Bda09g00041 938 PANTHER COPPER-TRANSPORTING ATPASE HMA5-RELATED 17 782 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda02g00643 Bda-Chr2:47391153 Bda09g00041 Bda-Chr9:615048 2.70E-14 dispersed
Bda02g00644 Bda-Chr2:47405113 Bda09g00041 Bda-Chr9:615048 9.26E-16 dispersed
Bda09g00041 Bda-Chr9:615048 Bda11g00103 Bda-Chr11:1242806 1.94E-68 dispersed
Bda09g00041 Bda-Chr9:615048 Bda09g00789 Bda-Chr9:14748283 7.83E-13 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda09g00041 K17686 - mnt:21407042 1251.5