Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda09g00057 ATGTTGGCTGGGTGTTCTAGTGCAACATTACTGTCACCGAGGCATAGATTGAGGAGCGAAGCAGCAGCGCAGTTTCAGGCTTGCCATTTTCAGTTACCTTCAATGAACACGCAGAGATTGGATTTACCATGCACTAGTTTCTCACGCAAAGAGACCTCGCGCTCGCAGCCCATCAGGCCAGTTGGGCTCCCAGTGGAGAAGACGATCGATTCAAAACCCAGCAGTTGCTCTCTCAAACAGAATATCAGGTTACCTCCTTTAGCTACAACAAGCGTTCAAACGCCATTTTCAGAAGCTCGGAGAGAGGTCGGAGGTGAGTATTGGAAGAAAGGGAAGAACTTGAAGAGATTTGTTGAAGATGAAGAAGAAGAGGAAGAAGTCTACGTGAACAGAGCTAAGAGGAAGAAAAGGGGAAGCTGCAAAAATGGAGACGATGAAGATGATTTGAGTTTTGGACAATTCGGCGATGCTAATTTTTGGTTCCAGCCAGGTTTCAGTCACCCTCAAAAAGTCTGCTTTGTTCCGAGCGAAGTCATTTCCTCGCCATTTGTGGAATCTGGTGTGCACAAAATAACTGAATTTGGAGAAAAGGAAGGAGGAGAAGCCAGCCATTGCCCGGTGAAAGACGCTTCCGATTCAAGTAATTCGTCCAGAAATCAAAGCTTGGTTCAAAGGGTAAACGAGAAAGCCGGAGAAGAAGAAGTTGGAAATGGATCTAGAAGAAATCCATATTCATTATTTCAAGGTTCTAGATTGGACGCTGAAGAATTTTTGGAAAATCAAGGCGAGGAAGAAGGGTTCGAACTCGTCAGCATGCTAGCGGCTTGTGTCGAAGCGATCAGATCGAAAAACATTGCATTGATCAATCATCTGATGAATAGATTAGGAGATCTTGCTTCTCCTCAAGGATCTTCAATAAAGCGACTTGTTTCTTACTATACCGAAGCCTTAGCTCTACGAGTCTCACGGCTATGGCCGCACATGTTTCACATAACGACCCCTCGAGATTTCGAGCGGGCCGATGACGATCCAGGCACTGCACTAAGGCTTCTAAACCAGGTCAGCCCGATTCCGAAGTTCATCCATTTCACATCCAATGAGGTAATTTTAAGAGCTTTTGAAGGGAAAGACAGAGTTCACATCATAGATTTTGAGATAAAGCAAGGTCTCCAATGGCCTAGCTTGTTTCAAAGTTTAGCCTCAAGACCAAATCCACCTACCCATGTGAGGATCACTGGAGTGGGCGAGTCGAAGCAGGAATTGAACGAAACGGGTGAGCGGCTTTCTGGGTTTGCCGAGGCATTGAATTTGCCGTTCGAGTTCCACCCGGTCGTCGACAGGCTCGAAGATGTCCGGCTATGGATGCTGCATGTCAAAGAACATGAATGTGTGACTGTAAATTGTGTCTTCCAGCTTCATAAAATGCTCTACGATGGCAATGGCAGGGCCATAAGAGACTTCCTAGGACTAATCAGAAGCACAAATCCTTCAACTGTCCTAATTGCAGAGCAAGAGGCATATCACAACGACCCAAATTTAGAGATCCGAGTCTCCAACTCACTGAAATACTATTCTGCCATTTTCGATTCTTTCGATTTGATCCTTCCACCCGATAGTCCCGTCAGAATCAAAATAGAAGAGATGTTCGGAATGGAGATTAGGAATATCATTGCTTGCGAGGGATCGCAGAGGATCGAGAGGCACGAGATGTTCGAGAAATGGAAGAAAACTATGGAGGAAAATGGGTTTAAGTGCAGTGGGATTTCTGAGAGGGAACTGATTCAGACCAAAATTCTGCTGAAGATGTATTCTTGTGAGGGTTATAATGTCAGCAAGCCAATGGAAGAGGTAGGAGCATTGACTCTAAATTGGGAAGAACAACCTCTGTATACTGTATCTGCATGGACGCCATTACAGGTTGCTGGAAGCTCGTCTTCTTTTTCTCAGACTTGA 1953 45.26 MLAGCSSATLLSPRHRLRSEAAAQFQACHFQLPSMNTQRLDLPCTSFSRKETSRSQPIRPVGLPVEKTIDSKPSSCSLKQNIRLPPLATTSVQTPFSEARREVGGEYWKKGKNLKRFVEDEEEEEEVYVNRAKRKKRGSCKNGDDEDDLSFGQFGDANFWFQPGFSHPQKVCFVPSEVISSPFVESGVHKITEFGEKEGGEASHCPVKDASDSSNSSRNQSLVQRVNEKAGEEEVGNGSRRNPYSLFQGSRLDAEEFLENQGEEEGFELVSMLAACVEAIRSKNIALINHLMNRLGDLASPQGSSIKRLVSYYTEALALRVSRLWPHMFHITTPRDFERADDDPGTALRLLNQVSPIPKFIHFTSNEVILRAFEGKDRVHIIDFEIKQGLQWPSLFQSLASRPNPPTHVRITGVGESKQELNETGERLSGFAEALNLPFEFHPVVDRLEDVRLWMLHVKEHECVTVNCVFQLHKMLYDGNGRAIRDFLGLIRSTNPSTVLIAEQEAYHNDPNLEIRVSNSLKYYSAIFDSFDLILPPDSPVRIKIEEMFGMEIRNIIACEGSQRIERHEMFEKWKKTMEENGFKCSGISERELIQTKILLKMYSCEGYNVSKPMEEVGALTLNWEEQPLYTVSAWTPLQVAGSSSSFSQT 650
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 1197850 1199802 - Bda030581.1 Bda09g00057 12307
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda09g00057 650 MobiDBLite consensus disorder prediction 208 226 - -
Bda09g00057 650 ProSiteProfiles GRAS family profile. 260 636 IPR005202 -
Bda09g00057 650 PANTHER SCARECROW-LIKE PROTEIN 28 7 640 IPR030027 -
Bda09g00057 650 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 7 640 IPR005202 -
Bda09g00057 650 MobiDBLite consensus disorder prediction 195 244 - -
Bda09g00057 650 Pfam GRAS domain family 269 636 IPR005202 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda09g00057 Bda-Chr9:1197850 Bda11g00148 Bda-Chr11:1930930 1.12E-77 dispersed
Bda09g00054 Bda-Chr9:1165544 Bda09g00057 Bda-Chr9:1197850 5.57E-61 proximal
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
16341 PF03514 GRAS 3.50E-127 CL0063 Bda TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda09g00057 - - tcc:18606459 882.863