Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda09g00069 ATGGACGGCCATTCTCTTCCATTCCCTTTTCACACCAGAGGCTTTCACCAGGAGCAGCATCAATTTCAAACCTCCGAGGACGAACAAACTGGAAGCAGCGGACTGAATAACAGAACCCAGAACAAGCGAGACCGGGATGACAGTATTGAGGACTCTGGCGCTGGAGAAAGCAGCAAGGAGGGCGGCACAGGTGGTGGAGAAGGCGAGATGACCAGAAGGCAGCGAGGCCGACCCGCTGGGTCAAAAAACAAGCCGAAGCCGCCCATCATCATCACCCGCGACAGTGCCAACGCCCTTCGGACCCACGTCATCGAGGTCACTGATGGCTGTGACATCGTCGAGAGCATTGCCACCTTCGCCCGTCGCCGGCAGCGTGGGCTCTGCATCCTGAGCGGCACCGGCACTGTCATGAACGTGTCAATAAGACAACCATCATCTCCCAGTGCAATCGTCAATTTACACGGCCGATTTGAAATTCTCTCTCTTTCCGGATCTTTTCTTCCTCCTCCTGCACCACCTGCGGCTACGAGCTTGACAATTTACTTAGCTGGAGGGCAAGGGCAGGTGGTCGGTGGAAGCGTCGTCGGAACCCTAATTGCCTCCGGCTCAGTTGTCATAATGGCGGCTTCGTTTAGCAACGCAGCATACGAGAGGCTTCCTCTCGACGAAGATGATCCGCCGTTGCCGATGCCTGGCCATGGTTTAGGGTCGCCTGGTGAAGTACCTGATCAACAACATCAGCAGCAGCAGCAACAACAACAACTTTTAGCAGATTCCAATGTTGCAAATTTATTTCATGGGTTGCCTCCTAATCTTCTCAACTCCATTCAGTTGCCTAACGAAGGGTATTGGGCAACTGGCCGACCACCTAACTGA 876 54.11 MDGHSLPFPFHTRGFHQEQHQFQTSEDEQTGSSGLNNRTQNKRDRDDSIEDSGAGESSKEGGTGGGEGEMTRRQRGRPAGSKNKPKPPIIITRDSANALRTHVIEVTDGCDIVESIATFARRRQRGLCILSGTGTVMNVSIRQPSSPSAIVNLHGRFEILSLSGSFLPPPAPPAATSLTIYLAGGQGQVVGGSVVGTLIASGSVVIMAASFSNAAYERLPLDEDDPPLPMPGHGLGSPGEVPDQQHQQQQQQQQLLADSNVANLFHGLPPNLLNSIQLPNEGYWATGRPPN 291
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 1361278 1362153 + Bda030595.1 Bda09g00069 12319
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda09g00069 291 MobiDBLite consensus disorder prediction 220 260 - -
Bda09g00069 291 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 3 290 IPR014476 GO:0003680
Bda09g00069 291 ProSiteProfiles PPC domain profile profile. 96 232 IPR005175 -
Bda09g00069 291 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 24-RELATED 3 290 - -
Bda09g00069 291 Pfam Plants and Prokaryotes Conserved (PCC) domain 100 213 IPR005175 -
Bda09g00069 291 PIRSF ESCAROLA 11 290 IPR014476 GO:0003680
Bda09g00069 291 MobiDBLite consensus disorder prediction 16 38 - -
Bda09g00069 291 SUPERFAMILY AF0104/ALDC/Ptd012-like 96 231 - -
Bda09g00069 291 MobiDBLite consensus disorder prediction 39 54 - -
Bda09g00069 291 MobiDBLite consensus disorder prediction 1 91 - -
Bda09g00069 291 Gene3D - 99 225 - -
Bda09g00069 291 MobiDBLite consensus disorder prediction 241 260 - -
Bda09g00069 291 CDD DUF296 100 167 IPR005175 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda09g00069 Bda-Chr9:1361278 Bda13g00424 Bda-Chr13:5179679 8.19E-102 dispersed
Bda07g00512 Bda-Chr7:6538506 Bda09g00069 Bda-Chr9:1361278 3.86E-160 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda09g00069 - - vvi:100265031 369.777