Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Bda09g00153 | ATGATTTTCTCGTCTGTTCCAGTCTATTTAGATCCTCCCAATTGGCAGCAGCCACCAGATGATCATCAGCTAAGAAATGAAAACCTCAACGAGATTGCATCCTTTCCCCAGCCACAGCGGCCACCCTCGAGCTCAACAAGGCCTGGTTCGATGGCTGACCGAGCCCGACTAGCCAAGATGCCCCAGCCGGAGGTTCAACTCAAGTGTCCAAGATGTGAATCGTCCAACACAAAGTTTTGCTACTACAACAATTACAACCTTTCTCAGCCTCGTCACTTCTGCAAGACTTGCCGGCGTTACTGGACCCAAGGCGGTGCTCTCCGCAACGTTCCGGTCGGAGGTGGCTGCCGAAGAAACAAGAAGAACAAAAGTAAATCCTCAAAGTCCTCGTCAGAAAGACCAACTACTAGTAATTTAAGCTCAGGCTCGATTCCGTCAGGAAATAGTACAAGAGAGATGATCAATCATTTCCAGCAAAACCCTAATCCGTTTCCCTTCATCTCCTCACTGCCAAGCTTTAGCAGGTATGGAGTTGGAACCTTAGAAGGACCGTCAAACTTCAACGAGATCCAGCTACAAAGTGAAATAGAAGGAGCGGATCATCAATGGCGGTCGCAGCAATTTCCTTTCCTGGGTGGTTTTGAATCGACAGGTTTGTACCCGTATCAAAATGACGGCGTTGAAGCTCCATCTTCAGCTGCTGAAGCTACTCATCTTCAAGAAACGACATTGAATACTAGGGCTACCCAATTTTCTCCTGTTAAAATTGAAGAAAGTCAAATGCTAAACTTAACCAGAGGACCATCGCTAGGAGTTTTGAACAACAGTCAGATCTATGGTGCAAATGCTTGGACAGATTTATCAGGTCTCAGCTCCTCCTCCACCAACCATTTCTTCTAA | 900 | 46.78 | MIFSSVPVYLDPPNWQQPPDDHQLRNENLNEIASFPQPQRPPSSSTRPGSMADRARLAKMPQPEVQLKCPRCESSNTKFCYYNNYNLSQPRHFCKTCRRYWTQGGALRNVPVGGGCRRNKKNKSKSSKSSSERPTTSNLSSGSIPSGNSTREMINHFQQNPNPFPFISSLPSFSRYGVGTLEGPSNFNEIQLQSEIEGADHQWRSQQFPFLGGFESTGLYPYQNDGVEAPSSAAEATHLQETTLNTRATQFSPVKIEESQMLNLTRGPSLGVLNNSQIYGANAWTDLSGLSSSSTNHFF | 299 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
9 | 2388071 | 2389135 | - | Bda030699.1 | Bda09g00153 | 12403 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Bda09g00153 | 299 | Pfam | Dof domain, zinc finger | 66 | 121 | IPR003851 | GO:0003677|GO:0006355 | |
Bda09g00153 | 299 | ProSitePatterns | Zinc finger Dof-type signature. | 69 | 105 | IPR003851 | GO:0003677|GO:0006355 | |
Bda09g00153 | 299 | ProSiteProfiles | Zinc finger Dof-type profile. | 67 | 121 | IPR003851 | GO:0003677|GO:0006355 | |
Bda09g00153 | 299 | PANTHER | DOF DOMAIN ZINC FINGER PROTEIN | 6 | 296 | - | - | |
Bda09g00153 | 299 | MobiDBLite | consensus disorder prediction | 19 | 50 | - | - | |
Bda09g00153 | 299 | MobiDBLite | consensus disorder prediction | 12 | 62 | - | - | |
Bda09g00153 | 299 | MobiDBLite | consensus disorder prediction | 111 | 155 | - | - | |
Bda09g00153 | 299 | PANTHER | DOF ZINC FINGER PROTEIN DOF1.4-RELATED | 6 | 296 | IPR045174 | GO:0003700|GO:0006355 | |
Bda09g00153 | 299 | MobiDBLite | consensus disorder prediction | 129 | 155 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Bda09g00153 | Bda-Chr9:2388071 | Bda14g00300 | Bda-Chr14:2027799 | 3.36E-62 | dispersed | |
Bda05g00969 | Bda-Chr5:58157463 | Bda09g00153 | Bda-Chr9:2388071 | 6.15E-66 | wgd | |
Bda07g00589 | Bda-Chr7:7221890 | Bda09g00153 | Bda-Chr9:2388071 | 4.49E-148 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
16353 | PF02701 | zf-Dof | 7.70E-33 | No_clan | Bda | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Bda09g00153 | - | - | jre:108993006 | 280.026 |