Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda09g00172 ATGGGTTGCTTCTGCTGCAGCGAAAAATCAAGCAAACGATCAGACAAATCCCAGAAAATCAATCATAGTAACCACAGCAATTTGGGAAACAAGCCGAATGATCAAACTGCTTCAGACACAGTGAAAGCTAATTCAAAATCGAAAGTAAAGAAAGATTCTGATGTAAAGGAGATAACCAAGGTTGATCAATTAACTTTAGATTTAAAGGGTTTGAATTTAAAGGATGGAGATTCTAATGATTTAAAAGCCAATGGCATGCGGGCAAAGACATTTACATTCGATGAACTTGCCGCAATAACCGGAGATTTCCGATCAGATTGCTTCTTGGGAGAAGGAGGGTTTGGTAGAGTCTACAAAGGGTATTTGGAGAAAATCAACCAGGATGTAGCTATCAAACGCCTTGATCGCAATGGAGTTCAAGGGATTAGGGAGTTTGTGGTGGAAGTCTTGACTTTAAGTATGGCCGACCACCCTAACCTCGTTAAACTAATTGGCTTTTGTGCCGAAGGGGATCAAAGATTGTTGGTTTATGAATATATGTCGCTTGGATCATTGGAAAATCACTTACACGACCTTCAACCTGATGGGAAAGTTCTTGATTGGAATACAAGAATGAAAATAGCTGCCGGGGCGGCCAGGGGATTGGAGTACTTGCACGATAAAATGAAGCCCCCTGTTATATATCGTGATTTGAAATGTTCAAATATTTTGATTGGTGAAGGGTATCATCCAAAGCTATCTGATTTTGGCCTGGCTAAAGTGGGACCCAGTGGGGATAAAACCCATGTTTCAACAAGGGTCATGGGCACGTATGGGTACTGCGCTCCGGACTATGCAATGACGGGTCAGCTTACTTTCAAATCGGATATTTACAGCTTTGGAGTCGTTCTATTGGAGCTCATTACTGGTAGGAAAGCCATTGATAATTCAAAAGCTCACAAGGAGCAAAATTTGGTTGCTTGGGCACGACCCTTGTTCCGAGACCGGAAGAAATTCTCACAAATGGTCGATCCGATGCTGCAAGGTCAATACCCTGTAAGAGGATTGTACCAAGCTCTCGCCATTGCTGCCATGTGTGTCCAAGAGCAGCCTAACATGAGACCTGTTATTTCCGACGTAGTTACTGCTTTAAACTACCTTGCTTCTCAGAAATACGAGTCCTCGACAAAACCCACCCAAAGTTCTCGAAGAAGTCCATCTCGAACCGATGACTAA 1215 42.8 MGCFCCSEKSSKRSDKSQKINHSNHSNLGNKPNDQTASDTVKANSKSKVKKDSDVKEITKVDQLTLDLKGLNLKDGDSNDLKANGMRAKTFTFDELAAITGDFRSDCFLGEGGFGRVYKGYLEKINQDVAIKRLDRNGVQGIREFVVEVLTLSMADHPNLVKLIGFCAEGDQRLLVYEYMSLGSLENHLHDLQPDGKVLDWNTRMKIAAGAARGLEYLHDKMKPPVIYRDLKCSNILIGEGYHPKLSDFGLAKVGPSGDKTHVSTRVMGTYGYCAPDYAMTGQLTFKSDIYSFGVVLLELITGRKAIDNSKAHKEQNLVAWARPLFRDRKKFSQMVDPMLQGQYPVRGLYQALAIAAMCVQEQPNMRPVISDVVTALNYLASQKYESSTKPTQSSRRSPSRTDD 404
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 2561771 2564473 - Bda030720.1 Bda09g00172 12422
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda09g00172 404 MobiDBLite consensus disorder prediction 1 52 - -
Bda09g00172 404 SMART serkin_6 103 380 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bda09g00172 404 PANTHER SERINE/THREONINE-PROTEIN KINASE PBL5-RELATED 1 401 - -
Bda09g00172 404 CDD STKc_IRAK 109 378 - -
Bda09g00172 404 Gene3D Transferase(Phosphotransferase) domain 1 180 401 - -
Bda09g00172 404 PANTHER OS07G0668900 PROTEIN 1 401 - -
Bda09g00172 404 ProSiteProfiles Protein kinase domain profile. 103 380 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bda09g00172 404 MobiDBLite consensus disorder prediction 385 404 - -
Bda09g00172 404 Pfam Protein kinase domain 108 374 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bda09g00172 404 ProSitePatterns Protein kinases ATP-binding region signature. 109 132 IPR017441 GO:0005524
Bda09g00172 404 SUPERFAMILY Protein kinase-like (PK-like) 89 390 IPR011009 -
Bda09g00172 404 ProSitePatterns Serine/Threonine protein kinases active-site signature. 226 238 IPR008271 GO:0004672|GO:0006468
Bda09g00172 404 Gene3D Phosphorylase Kinase; domain 1 88 179 - -
Bda09g00172 404 MobiDBLite consensus disorder prediction 21 43 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda09g00172 Bda-Chr9:2561771 Bda13g00167 Bda-Chr13:2136918 2.50E-176 dispersed
Bda01g00267 Bda-Chr1:27218381 Bda09g00172 Bda-Chr9:2561771 0 wgd
Bda09g00172 Bda-Chr9:2561771 Bda09g01487 Bda-Chr9:46695251 3.85E-133 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
69787 PF00069 Pkinase 2.60E-45 CL0016 Bda PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda09g00172 - - bhj:120083806 621.698