Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda09g00178 ATGGAGAGCAGTGAAGCAAATACATCTGGTTCATCAAACCCTGCAATTTCTATGTCGCCGGTTTCAGCGTCTTCTCCATCCTCTCAGGGAGTATCTTTGCATGTAATTCTCAGTCCTTGCGCAGCTTGCAGGATTTTGCGGCGGAGATGCGCTGAGAAATGTGTGCTGGCGCCGTACTTTCCTCCGTCTGATCCGGCGAAATTCACCATAGCTCATCGAGTCTTTGGTGCCAGTAATATCATCAAGTTTTTGCAGGAGCTACCAGAGAGTCAAAGAGCCGACGCAGTTAGCAGCATGGTGTACGAAGCAAGTGCGAGAATAAGAAATCCAGTTTACGGATGTGCAGGCGCCATTTGCCAGCTTCAAAAGCAAGTGAACGAGCTTCAAGCTGAATTAGCCAAAGCCCAGGCCGAGCTAGCCAACATGCAGCATCAGCAGACCAACCTCGTCTCTCTAATTTGCAGAGAATTTTCACAGTCTTCTCAGCCATGGCCGAATCACCATAATCATCGTCAATCTCTTGATGATTTCATTCTGAACGACCCTCATTCTTACCTCACGAACAACGCTGGTTTCATTGAAGACGGCTCTATATGGGAGCCTCTTTGGACCTGA 615 48.29 MESSEANTSGSSNPAISMSPVSASSPSSQGVSLHVILSPCAACRILRRRCAEKCVLAPYFPPSDPAKFTIAHRVFGASNIIKFLQELPESQRADAVSSMVYEASARIRNPVYGCAGAICQLQKQVNELQAELAKAQAELANMQHQQTNLVSLICREFSQSSQPWPNHHNHRQSLDDFILNDPHSYLTNNAGFIEDGSIWEPLWT 204
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 2626266 2627241 + Bda030726.1 Bda09g00178 12428
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda09g00178 204 Pfam Lateral organ boundaries (LOB) domain 39 136 IPR004883 -
Bda09g00178 204 Coils Coil 118 145 - -
Bda09g00178 204 ProSiteProfiles LOB domain profile. 38 139 IPR004883 -
Bda09g00178 204 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 25 203 - -
Bda09g00178 204 PANTHER LOB DOMAIN-CONTAINING PROTEIN 1 25 203 - -
Bda09g00178 204 MobiDBLite consensus disorder prediction 1 23 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bda07g00619 Bda09g00178 BCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda09g00178 Bda-Chr9:2626266 Bda14g00338 Bda-Chr14:2427324 6.72E-69 dispersed
Bda07g00619 Bda-Chr7:7551742 Bda09g00178 Bda-Chr9:2626266 4.16E-114 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
16355 PF03195 LOB 4.70E-41 No_clan Bda TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda09g00178 - - jre:108989605 243.432