Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Bda09g00178 | ATGGAGAGCAGTGAAGCAAATACATCTGGTTCATCAAACCCTGCAATTTCTATGTCGCCGGTTTCAGCGTCTTCTCCATCCTCTCAGGGAGTATCTTTGCATGTAATTCTCAGTCCTTGCGCAGCTTGCAGGATTTTGCGGCGGAGATGCGCTGAGAAATGTGTGCTGGCGCCGTACTTTCCTCCGTCTGATCCGGCGAAATTCACCATAGCTCATCGAGTCTTTGGTGCCAGTAATATCATCAAGTTTTTGCAGGAGCTACCAGAGAGTCAAAGAGCCGACGCAGTTAGCAGCATGGTGTACGAAGCAAGTGCGAGAATAAGAAATCCAGTTTACGGATGTGCAGGCGCCATTTGCCAGCTTCAAAAGCAAGTGAACGAGCTTCAAGCTGAATTAGCCAAAGCCCAGGCCGAGCTAGCCAACATGCAGCATCAGCAGACCAACCTCGTCTCTCTAATTTGCAGAGAATTTTCACAGTCTTCTCAGCCATGGCCGAATCACCATAATCATCGTCAATCTCTTGATGATTTCATTCTGAACGACCCTCATTCTTACCTCACGAACAACGCTGGTTTCATTGAAGACGGCTCTATATGGGAGCCTCTTTGGACCTGA | 615 | 48.29 | MESSEANTSGSSNPAISMSPVSASSPSSQGVSLHVILSPCAACRILRRRCAEKCVLAPYFPPSDPAKFTIAHRVFGASNIIKFLQELPESQRADAVSSMVYEASARIRNPVYGCAGAICQLQKQVNELQAELAKAQAELANMQHQQTNLVSLICREFSQSSQPWPNHHNHRQSLDDFILNDPHSYLTNNAGFIEDGSIWEPLWT | 204 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
9 | 2626266 | 2627241 | + | Bda030726.1 | Bda09g00178 | 12428 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Bda09g00178 | 204 | Pfam | Lateral organ boundaries (LOB) domain | 39 | 136 | IPR004883 | - | |
Bda09g00178 | 204 | Coils | Coil | 118 | 145 | - | - | |
Bda09g00178 | 204 | ProSiteProfiles | LOB domain profile. | 38 | 139 | IPR004883 | - | |
Bda09g00178 | 204 | PANTHER | LOB DOMAIN-CONTAINING PROTEIN 4-RELATED | 25 | 203 | - | - | |
Bda09g00178 | 204 | PANTHER | LOB DOMAIN-CONTAINING PROTEIN 1 | 25 | 203 | - | - | |
Bda09g00178 | 204 | MobiDBLite | consensus disorder prediction | 1 | 23 | - | - |
Event-related genes

Select | Gene_1 | Gene_2 | Event_name |
---|---|---|---|
Bda07g00619 | Bda09g00178 | BCT |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Bda09g00178 | Bda-Chr9:2626266 | Bda14g00338 | Bda-Chr14:2427324 | 6.72E-69 | dispersed | |
Bda07g00619 | Bda-Chr7:7551742 | Bda09g00178 | Bda-Chr9:2626266 | 4.16E-114 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
16355 | PF03195 | LOB | 4.70E-41 | No_clan | Bda | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Bda09g00178 | - | - | jre:108989605 | 243.432 |