Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Bda09g00193 | ATGGGTCAAATTCAGTATTCGGATAAGTACTTTGATGACACTAATGAATACAGGCATGTTGTGCTTCCGCCTGAGGTAGCGAAGTTGCTCCCCAAGAATCGTCTTCTGACTGAAAATGAATGGCGAGCAATCGGGGTTCAACAGAGCCGTGGGTGGGTACACTACGCGATACATCGTCCAGAGCCACACATCATGTTGTTCAGAAGGCCATTGAACTATCAACAACAGCAGGAGAATCAATCTCAGCAAGCTAAGTGA | 258 | 46.51 | MGQIQYSDKYFDDTNEYRHVVLPPEVAKLLPKNRLLTENEWRAIGVQQSRGWVHYAIHRPEPHIMLFRRPLNYQQQQENQSQQAK | 85 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
9 | 2764685 | 2765375 | + | Bda030743.1 | Bda09g00193 | 12443 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Bda09g00193 | 85 | Pfam | Cyclin-dependent kinase regulatory subunit | 4 | 70 | IPR000789 | GO:0016538 | |
Bda09g00193 | 85 | PANTHER | CYCLIN-DEPENDENT KINASES REGULATORY SUBUNIT | 1 | 84 | - | - | |
Bda09g00193 | 85 | PANTHER | CYCLIN-DEPENDENT KINASES REGULATORY SUBUNIT/60S RIBOSOME SUBUNIT BIOGENESIS PROTEIN NIP7 | 1 | 84 | - | - | |
Bda09g00193 | 85 | SMART | CKS_2 | 3 | 72 | IPR000789 | GO:0016538 | |
Bda09g00193 | 85 | Gene3D | - | 1 | 84 | IPR036858 | GO:0016538 | |
Bda09g00193 | 85 | PRINTS | Cyclin-dependent kinase regulatory subunit signature | 40 | 54 | IPR000789 | GO:0016538 | |
Bda09g00193 | 85 | PRINTS | Cyclin-dependent kinase regulatory subunit signature | 3 | 17 | IPR000789 | GO:0016538 | |
Bda09g00193 | 85 | PRINTS | Cyclin-dependent kinase regulatory subunit signature | 18 | 32 | IPR000789 | GO:0016538 | |
Bda09g00193 | 85 | PRINTS | Cyclin-dependent kinase regulatory subunit signature | 55 | 69 | IPR000789 | GO:0016538 | |
Bda09g00193 | 85 | SUPERFAMILY | Cell cycle regulatory proteins | 1 | 82 | IPR036858 | GO:0016538 |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Bda09g00193 | Bda-Chr9:2764685 | Bda09g01433 | Bda-Chr9:46153909 | 1.30E-47 | dispersed | |
Bda09g00193 | Bda-Chr9:2764685 | Bda09g00223 | Bda-Chr9:3050619 | 5.42E-60 | transposed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Bda09g00193 | K02219 | - | dcr:108218560 | 156.377 |