Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda09g00193 ATGGGTCAAATTCAGTATTCGGATAAGTACTTTGATGACACTAATGAATACAGGCATGTTGTGCTTCCGCCTGAGGTAGCGAAGTTGCTCCCCAAGAATCGTCTTCTGACTGAAAATGAATGGCGAGCAATCGGGGTTCAACAGAGCCGTGGGTGGGTACACTACGCGATACATCGTCCAGAGCCACACATCATGTTGTTCAGAAGGCCATTGAACTATCAACAACAGCAGGAGAATCAATCTCAGCAAGCTAAGTGA 258 46.51 MGQIQYSDKYFDDTNEYRHVVLPPEVAKLLPKNRLLTENEWRAIGVQQSRGWVHYAIHRPEPHIMLFRRPLNYQQQQENQSQQAK 85
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 2764685 2765375 + Bda030743.1 Bda09g00193 12443
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda09g00193 85 Pfam Cyclin-dependent kinase regulatory subunit 4 70 IPR000789 GO:0016538
Bda09g00193 85 PANTHER CYCLIN-DEPENDENT KINASES REGULATORY SUBUNIT 1 84 - -
Bda09g00193 85 PANTHER CYCLIN-DEPENDENT KINASES REGULATORY SUBUNIT/60S RIBOSOME SUBUNIT BIOGENESIS PROTEIN NIP7 1 84 - -
Bda09g00193 85 SMART CKS_2 3 72 IPR000789 GO:0016538
Bda09g00193 85 Gene3D - 1 84 IPR036858 GO:0016538
Bda09g00193 85 PRINTS Cyclin-dependent kinase regulatory subunit signature 40 54 IPR000789 GO:0016538
Bda09g00193 85 PRINTS Cyclin-dependent kinase regulatory subunit signature 3 17 IPR000789 GO:0016538
Bda09g00193 85 PRINTS Cyclin-dependent kinase regulatory subunit signature 18 32 IPR000789 GO:0016538
Bda09g00193 85 PRINTS Cyclin-dependent kinase regulatory subunit signature 55 69 IPR000789 GO:0016538
Bda09g00193 85 SUPERFAMILY Cell cycle regulatory proteins 1 82 IPR036858 GO:0016538
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda09g00193 Bda-Chr9:2764685 Bda09g01433 Bda-Chr9:46153909 1.30E-47 dispersed
Bda09g00193 Bda-Chr9:2764685 Bda09g00223 Bda-Chr9:3050619 5.42E-60 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda09g00193 K02219 - dcr:108218560 156.377