Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda09g00209 ATGGCGGGTGTCGAGGGTTCACCTGGAAGCTCCATGCATGGAGTCACAGGAAGAGAACAGACCTTCGCCTCCTCTGTTGCTTCTCCGAAGGTGCCTAGCGACCCGACCGCGAAGTTCGATCTTCCGGTTGATTCTGAACATAAGGCTAAGGTTTTCAAGCTCTTCTCCTTCGCTAATCCCCATATGAGAACCTTCCACCTGTCGTGGATTTCCTTCTTCACCTGCTTCGTCTCCACCTTCGCCGCCGCTCCTCTCGTCCCGATCATCAGAGACAATCTTAGCCTGACGAAACCAGACATCGGAAACGCCGGCGTCGCATCGGTTTCCGGCAGTATTTTCTCGAGGCTTGTGATGGGGGCAGTCTGCGACCTCCTCGGTCCTCGCTATGGCTGTGCCTTTCTCATCATGCTCGCCGCTCCGACCGTCTTCTGCATGTCTTTTGTATCATCGGCGGCCGGGTACATAACGGTGCGGTTCATGATAGGATTCTCTTTGGCTACTTTCGTCTCCTGCCAGTACTGGATGAGCACCATGTTCAACAGCCAGATCATAGGGCTGGTCAACGGAACGGCGGCGGGATGGGGGAACATGGGAGGAGGAGCGACTCAGCTGTTGATGCCTTTTCTTTATGAGATTATCAAAAGAGCTGGTTCTACTCCGTTTACTGCCTGGAGAATCGCCTTCTTCATCCCCGGTTGGATGCATGTGATCATGGGTATCCTGGTTTTAACCCTAGGCCAAGATTTGCCTGATGGAAATCTAAGCACTCTTCAGAAAAAGGGTGATGTTGCTAAAGACAAGTTCTCCAAGGTTCTTTGGTATGCGGTTACGAATTACAGAACATGGATCTTCGTCCTCCTCTATGGCTACTCCATGGGAGTGGAGCTTTCTACTGATAACGTCATCGCTGAGTATTTCTACGACAGGTTTGACCTGAATCTTCACACTGCCGGAATCATAGCAGCGAGCTTCGGAATGGCTAACCTAGTGGCTCGTCCTTTCGGTGGGTACGCTTCCGACGTCGCGGCTCGTTATTTTGGAATGAGAGGAAGGCTATGGACCCTCTGGATCCTCCAAACCCTAGGTGGAGTTTTCTGCGTTTGGCTGGGAAGGGCCACCTCCCTCCCCATCGCCATCTTCGCCATGATTCTCTTCTCCATCGGAGCTCAGGCGGCGTGCGGCGCCACTTTTGGCATCATCCCCTTCATCTCTCGCCGCTCCCTGGGAATTATCTCAGGGTTGACCGGCGCCGGAGGGAACTTCGGTTCTGGGCTGACGCAGTTAGTGTTCTTCACAAACGCAAGCTTTTCTACAGAAAAAGGTCTGACTTACATGGGGGCGATGATCATTGCCTGCACGTTGCCAGTTACTCTGGTTCACTTTCCACAGTGGGGAAGCATGTTCTTGCCGCCGTCAAGGAGCGTAGAGAAAGGTACAGAAGAATTCTATTACGGGTCGGAATGGAATGATGATGAGAAGAAGAAGGGGCTTCACCAGCAGAGTATCAAGTTCGCTGAAAACAGTCGATCAGAACGAGGAAGACGGGTTGCTTCAGCTCCTACTCCACCAAACACAACACCTACTCATGTTTAA 1593 52.23 MAGVEGSPGSSMHGVTGREQTFASSVASPKVPSDPTAKFDLPVDSEHKAKVFKLFSFANPHMRTFHLSWISFFTCFVSTFAAAPLVPIIRDNLSLTKPDIGNAGVASVSGSIFSRLVMGAVCDLLGPRYGCAFLIMLAAPTVFCMSFVSSAAGYITVRFMIGFSLATFVSCQYWMSTMFNSQIIGLVNGTAAGWGNMGGGATQLLMPFLYEIIKRAGSTPFTAWRIAFFIPGWMHVIMGILVLTLGQDLPDGNLSTLQKKGDVAKDKFSKVLWYAVTNYRTWIFVLLYGYSMGVELSTDNVIAEYFYDRFDLNLHTAGIIAASFGMANLVARPFGGYASDVAARYFGMRGRLWTLWILQTLGGVFCVWLGRATSLPIAIFAMILFSIGAQAACGATFGIIPFISRRSLGIISGLTGAGGNFGSGLTQLVFFTNASFSTEKGLTYMGAMIIACTLPVTLVHFPQWGSMFLPPSRSVEKGTEEFYYGSEWNDDEKKKGLHQQSIKFAENSRSERGRRVASAPTPPNTTPTHV 530
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 2972258 2974007 + Bda030760.1 Bda09g00209 12459
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda09g00209 530 MobiDBLite consensus disorder prediction 13 31 - -
Bda09g00209 530 CDD MFS_NRT2_like 65 458 IPR044772 GO:0015112
Bda09g00209 530 PANTHER HIGH-AFFINITY NITRATE TRANSPORTER 2.1-LIKE 1 527 - -
Bda09g00209 530 MobiDBLite consensus disorder prediction 491 530 - -
Bda09g00209 530 Gene3D MFS general substrate transporter like domains 57 254 IPR036259 -
Bda09g00209 530 ProSiteProfiles Major facilitator superfamily (MFS) profile. 64 458 IPR020846 GO:0022857
Bda09g00209 530 MobiDBLite consensus disorder prediction 491 513 - -
Bda09g00209 530 Gene3D MFS general substrate transporter like domains 264 466 IPR036259 -
Bda09g00209 530 PANTHER HIGH-AFFINITY NITRATE TRANSPORTER 2.3 1 527 IPR044772 GO:0015112
Bda09g00209 530 SUPERFAMILY MFS general substrate transporter 57 459 IPR036259 -
Bda09g00209 530 Pfam Major Facilitator Superfamily 69 425 IPR011701 GO:0022857|GO:0055085
Bda09g00209 530 MobiDBLite consensus disorder prediction 1 34 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bda02g00746 Bda09g00209 CCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda09g00209 Bda-Chr9:2972258 Bda10g01035 Bda-Chr10:44440754 0 dispersed
Bda09g00209 Bda-Chr9:2972258 Bda09g00210 Bda-Chr9:2982143 0 tandem
Bda02g00746 Bda-Chr2:48216856 Bda09g00209 Bda-Chr9:2972258 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda09g00209 K02575 - jre:108985433 954.125