Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Bda09g00218 | ATGTTTAATCAGTTCGAAGCTTCTGCAAACCCACTAATGCAGCTCCAAGGCTTTGATTTGGAGCTTCATCATTTCATGGCCAGTTCTAACTTCGACCAGTTTGTCGATCTAATCAGAGGAGAAAACGAAAACCCAGTTTATGATGGGTGTTTTGCAGATGATCAGTTTGGTCCGTCAAACCCAGGAGATATCTTGAATTTCAATGGCGTTCCTGGATCAGACGGCCAAGACTTTATGATGTTTAACAGATTGGAGAGATTTGATGATGGAGAAGTGATCAAGGGCGGGGAAGAAGATGATGAGAATGATGAGGAGGATTCTTCTGCTACGACTACGACAGTGACGAATGAAACGACGGCGAAGGGGGGTAAGGCCGACAGATCGAGAACTTTGATTTCAGAGAGAAGAAGAAGAGGGAGGATGAAAGAGAAGCTTTATGCACTGCGTTCATTGGTTCCAAACATAACCAAGATGGATAAAGCCTCCATTGTTGGAGATGCTGTATTATACGTGCAAGAGCTGCAAATGCAGGCCAGAAAACTCAAGGCTGAGATAAAGGGCATAGAAGAAACGATTGGAAGAGCAGAAGGCTATGGAGGAGTAGCTCAAAACCCTGAAAAGATTCATCGGATTCCTCGTTCTTCCAGTTCGGTTCCAAAGAAAATCACTCAGATGGATATTTTTCAGGTCGAGGAAAGAGGGTTTTACTTGAGGATAGAATGCGAGAGAGGAGATGGAGTAGCCAGGTCTCTTTACAAAGTTGTTGAATCTATGAGGGGATTTAATGTTCAGTGCTCAAATTTGACGACTCAGACTCAAACATTTGTTTTGACTGCAACTCTCAACGTGGTGAAAGATTGTGAGCAGGAGATGCACTTGCCAAATTTGAAGGTTTGGTTGACGGGAGCTCTTCTTAACCAAGGATTTGAGTTTAAACCACCTTTCCCCAACTTGTAG | 957 | 43.47 | MFNQFEASANPLMQLQGFDLELHHFMASSNFDQFVDLIRGENENPVYDGCFADDQFGPSNPGDILNFNGVPGSDGQDFMMFNRLERFDDGEVIKGGEEDDENDEEDSSATTTTVTNETTAKGGKADRSRTLISERRRRGRMKEKLYALRSLVPNITKMDKASIVGDAVLYVQELQMQARKLKAEIKGIEETIGRAEGYGGVAQNPEKIHRIPRSSSSVPKKITQMDIFQVEERGFYLRIECERGDGVARSLYKVVESMRGFNVQCSNLTTQTQTFVLTATLNVVKDCEQEMHLPNLKVWLTGALLNQGFEFKPPFPNL | 318 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
9 | 3035966 | 3037969 | + | Bda030770.1 | Bda09g00218 | 12468 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Bda09g00218 | 318 | Gene3D | - | 116 | 191 | IPR036638 | GO:0046983 | |
Bda09g00218 | 318 | MobiDBLite | consensus disorder prediction | 92 | 136 | - | - | |
Bda09g00218 | 318 | PANTHER | TRANSCRIPTION FACTOR FER-LIKE IRON DEFICIENCY-INDUCED TRANSCRIPTION FACTOR | 91 | 311 | - | - | |
Bda09g00218 | 318 | SUPERFAMILY | HLH, helix-loop-helix DNA-binding domain | 123 | 188 | IPR036638 | GO:0046983 | |
Bda09g00218 | 318 | Pfam | Helix-loop-helix DNA-binding domain | 130 | 175 | IPR011598 | GO:0046983 | |
Bda09g00218 | 318 | SMART | finulus | 131 | 180 | IPR011598 | GO:0046983 | |
Bda09g00218 | 318 | MobiDBLite | consensus disorder prediction | 122 | 136 | - | - | |
Bda09g00218 | 318 | ProSiteProfiles | Myc-type, basic helix-loop-helix (bHLH) domain profile. | 125 | 174 | IPR011598 | GO:0046983 | |
Bda09g00218 | 318 | Coils | Coil | 171 | 191 | - | - | |
Bda09g00218 | 318 | PANTHER | TRANSCRIPTION FACTOR SCREAM2-RELATED | 91 | 311 | - | - |
Event-related genes

Select | Gene_1 | Gene_2 | Event_name |
---|---|---|---|
Bda02g00730 | Bda09g00218 | CCT | |
Bda07g00648 | Bda09g00218 | BCT |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Bda09g00218 | Bda-Chr9:3035966 | Bda11g01575 | Bda-Chr11:48947578 | 3.91E-14 | dispersed | |
Bda01g01894 | Bda-Chr1:55110866 | Bda09g00218 | Bda-Chr9:3035966 | 1.38E-09 | transposed | |
Bda14g00621 | Bda-Chr14:4668395 | Bda09g00218 | Bda-Chr9:3035966 | 2.93E-16 | transposed | |
Bda02g00730 | Bda-Chr2:48132745 | Bda09g00218 | Bda-Chr9:3035966 | 3.21E-06 | wgd | |
Bda07g00648 | Bda-Chr7:7818050 | Bda09g00218 | Bda-Chr9:3035966 | 1.56E-145 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
16359 | PF00010 | HLH | 4.00E-09 | No_clan | Bda | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Bda09g00218 | - | - | qsu:112032263 | 296.204 |