Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda09g00223 ATGGGTCAAATTCAGTATTCGGATAAGTATTTTGATGACGCTAATGAATACAGGCATGTTGTGCTTCCGCCTGAGGTAGCGAAGTTGCTTCCCAAGAATCGTCTTCTGACTGAAAATGAATGGCGAGCAATTGGGGTTCAACAGAGCCGTGGGTGGGTACACTACGCGATACATCGTCCCGAGCCACACATCATGTTGTTCAGGAGGCCATTGAACTATCAACAACAGCAGGAGAATCAGTCTCAGCAAGCTAAGTGA 258 46.9 MGQIQYSDKYFDDANEYRHVVLPPEVAKLLPKNRLLTENEWRAIGVQQSRGWVHYAIHRPEPHIMLFRRPLNYQQQQENQSQQAK 85
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 3050619 3051308 - Bda030775.1 Bda09g00223 12473
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda09g00223 85 SUPERFAMILY Cell cycle regulatory proteins 1 82 IPR036858 GO:0016538
Bda09g00223 85 Gene3D - 1 84 IPR036858 GO:0016538
Bda09g00223 85 Pfam Cyclin-dependent kinase regulatory subunit 4 70 IPR000789 GO:0016538
Bda09g00223 85 SMART CKS_2 3 72 IPR000789 GO:0016538
Bda09g00223 85 PANTHER CYCLIN-DEPENDENT KINASES REGULATORY SUBUNIT 1 84 - -
Bda09g00223 85 PANTHER CYCLIN-DEPENDENT KINASES REGULATORY SUBUNIT/60S RIBOSOME SUBUNIT BIOGENESIS PROTEIN NIP7 1 84 - -
Bda09g00223 85 PRINTS Cyclin-dependent kinase regulatory subunit signature 40 54 IPR000789 GO:0016538
Bda09g00223 85 PRINTS Cyclin-dependent kinase regulatory subunit signature 18 32 IPR000789 GO:0016538
Bda09g00223 85 PRINTS Cyclin-dependent kinase regulatory subunit signature 55 69 IPR000789 GO:0016538
Bda09g00223 85 PRINTS Cyclin-dependent kinase regulatory subunit signature 3 17 IPR000789 GO:0016538
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bda09g01433 Bda09g00223 CCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda09g00193 Bda-Chr9:2764685 Bda09g00223 Bda-Chr9:3050619 5.42E-60 transposed
Bda09g00223 Bda-Chr9:3050619 Bda09g01433 Bda-Chr9:46153909 7.21E-47 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda09g00223 K02219 - twl:120017141 154.451