Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda09g00228 ATGGCTCTGAATCCATGGCCGCATTTCCTTCAAGTTCCAGTTCACTCGATCTATTCATCGTCTCACTGTCTACTTTACGCCGACGCTGTCTCTGTATCAAGCTTTTTTTCTCAACATGCAAGTCTTCCTTCTCTGACTGCCGCGCGGAGCGGGGTCTCGTTGGTCCCAACTGTAGTGAAGGCCTCGTCCAGAGTGAAACGTTTCGCTAAGTCCACAGAGGAGGAGAAGTTAAGTGGATCGGAAATTCTAGCTGCCGAAGTTGTCGGAAGGAGTGAGCTTGACGATGAGAGTACCGCTCCATATCAGAGTTCGGAATCCGTTACTCTTCCTGCGCAGAGGATTCTTCCGTCATCGTTGAGTGATTCACTTTTGCTTGGGATTCGAGAGCCGGTTTATGAGGTGGTAGAAGTGAAATCAAATGGATCGGTATCCACTCAAAAGATTAACAGGCGTCAGTTGTTAAAGTTGAGTGGACTTCGCCCCCGTGATATCCGGAGTGTAGATCCTTCTTTGTTTTTGACAAACTCGATGCCTTCATTGGTGGTTCGTGAGCATGCTATTTTGCTTAATCTGGGATCTTTGCGAGCGATAGCAATGAAGGAGTGTGTCCTCATATTTGACTATAACCGTAAAGGAGGGCAAGCTTTTATTGAGTCACTATTGCCTCGGTTGAACCCAAAAAGCACGAATGGGGGGCCATCAATGCCATTTGAACTTGAGGTTGTTGAAGCAGCATTGCTGTCACGAACACAGAGGTTAGAGCAGAGACTAATGAATGTAGAACCTCGTGTTCAAGCTCTACTTAAGGTTTTGCCTACCAAATTAACTGCTGATGTATTGGAACAACTTCGCATTAGCAAGCAGACCTTGGTTGAACTGGGATCCAGAGCAGGGGCACTCAGACAAATGTTGCTTGATCTTTTGGAGGATCCTCATGAAATACGTCGCATTTGCATCATGGGGAGAAACTGTACATTGAAGAAAGGAAGTGAAGATGTTGAGTGTTCTGTCCCTCTAGAAAAACAAATTGCTGACGAAGAAGAGGAAGAAATTGAGATGCTTCTGGAAAATTATCTTCAAAGGTGCGAATCTTGTCATGGTCAGGCTGAAAGACTTCTGGACTCTGCAAAAGAAATGGAAGATTCTATTGCTGTCAATTTGAGCTCAAGGAGGTTGGAGGTCAGCAGAGTCGAACTACTTCTTCAAGTAGGGACATTTTGTGTGGCAGTTGGTGCTTTAGTTGCAGGTATCTTTGGCATGAACTTAAGGTCATATCTTGAGGAGCATGTGATTGCCTTTTGGACTACTACAGCAGGGATCATAGTTGGCGGTATTGTGGCATTTTTACTCATGTATTATTATCTCAGGCAAGAAGGGTATTATAAGGAAATTCGATTAAGGTAA 1404 44.66 MALNPWPHFLQVPVHSIYSSSHCLLYADAVSVSSFFSQHASLPSLTAARSGVSLVPTVVKASSRVKRFAKSTEEEKLSGSEILAAEVVGRSELDDESTAPYQSSESVTLPAQRILPSSLSDSLLLGIREPVYEVVEVKSNGSVSTQKINRRQLLKLSGLRPRDIRSVDPSLFLTNSMPSLVVREHAILLNLGSLRAIAMKECVLIFDYNRKGGQAFIESLLPRLNPKSTNGGPSMPFELEVVEAALLSRTQRLEQRLMNVEPRVQALLKVLPTKLTADVLEQLRISKQTLVELGSRAGALRQMLLDLLEDPHEIRRICIMGRNCTLKKGSEDVECSVPLEKQIADEEEEEIEMLLENYLQRCESCHGQAERLLDSAKEMEDSIAVNLSSRRLEVSRVELLLQVGTFCVAVGALVAGIFGMNLRSYLEEHVIAFWTTTAGIIVGGIVAFLLMYYYLRQEGYYKEIRLR 467
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 3077204 3081754 - Bda030780.2 Bda09g00228 12478
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda09g00228 467 CDD Mrs2_Mfm1p-like 134 456 IPR039204 -
Bda09g00228 467 Coils Coil 341 361 - -
Bda09g00228 467 Gene3D Magnesium transport protein CorA, transmembrane region 209 392 - -
Bda09g00228 467 Gene3D - 127 208 - -
Bda09g00228 467 Pfam CorA-like Mg2+ transporter protein 343 456 IPR002523 GO:0016020|GO:0030001|GO:0046873|GO:0055085
Bda09g00228 467 PANTHER MG2+ TRANSPORTER PROTEIN, CORA-LIKE/ZINC TRANSPORT PROTEIN ZNTB-RELATED 43 457 - -
Bda09g00228 467 PANTHER RNA SPLICING PROTEIN MRS2, MITOCHONDRIAL 43 457 IPR039204 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda09g00228 Bda-Chr9:3077204 Bda11g01176 Bda-Chr11:12156585 2.27E-10 dispersed
Bda09g00228 Bda-Chr9:3077204 Bda12g00562 Bda-Chr12:9654647 1.45E-18 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda09g00228 K16075 - pvy:116140250 600.512