Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda09g00246 ATGGCTTCCATGCCGACGACCTTCTGCATTTTCTTCTTCTTCTTCACCGCTCTCTTCTCTGTCTTTTCTTTCTTTCTTTACATCTTGAGGATGAAGCTTTGGTGCAACTGTGAAGTTTGCCGGAGCTACTTATCCTGTAACTGGGTTTATGAGTTTCGTAATCTCTCCGATTGGTATACTCATCTTCTCAGAAAGTCGCCGACCGGAACTATTCACGTTCACGTCCTCGGAAACATTATTACTGCGAACCCCGACAACGTCGAGCATATTCTGAAGACGAAATTTGAAAATTATCCGAAAGGGAAACGTTTCTCGGTGATTCTCGGCGATCTTCTTGGTCGAGGTATTTTCAACGTCGACGGCGATGAATGGTTGTTTCAACGGAAAATGGCGAGTTTGGAGCTCGGAAGCTTTTCCGTCCGAACTTTCGCGAACGAGATCGTAACCGGCGAGATTAAGACCAGGCTGATTCCTCTCCTCTCTTCAGTTTCTGATAAAAAAGATCAAATTCTGGATTTACAGGACGTCTTCCGACGATTCTCCTTCGATAATATCTGCAAATTCTCATTCGGATTAGACCCAGGTTGCCTGGAGTTATCTCTTCCGATTTCTGATTTTGCAGAGGCGTTCGATCTCGCGACGAAACTATCGGCAGAGCGAGGGATGACTCTATCTCCGATCATCTGGAAGCTGAAGCGGATTCTGAAACTAGGATCAGAGAAGAAGCTGGAAGAAGCCATCAAACTAGTGAATATTCTAGCAGCGGAGATGATAAATCAGCGACGAAACCTCAGTGTTGGCGAAAAACAAGATCTTCTGTCGCGTTTCATGGCTTCCATCGACGACGACTGCTATCTCCGAGACATCGTCATCAGCTTTCTCTTGGCCGGTCGGGACACTGTTGCGGCGGCGCTAACTAGCTTTTTCTGGTTATTGTCAAACAATCCAGAGGTGGAATCCGAGATCAGAGAGGAGATAAACCGGGTCATGGGTCAAAATATGGAGCCTGATAGCTTTGAAGCCGCGAAAGAAATGCATTATGTTCATGCAGCATTGTATGAAAGTATGCGGCTTTTCCCGCCTGTTCAGTTCGACTCAAAGTTCGCCGAGGAAGACGACATTTTTCCCGATGGAACATTTGTCCGAAAAGGAACCCGGGTTACTTACCACCCGTATGCAATGGGTCGGATGGAGCCGATCTGGGGGCCGGATTGCCTGGACTTCAAACCTGAAAGATGGCTCAAGAATGGACTTTTCTCACCCCAAAACCCGTTCAAGTACCCGGTTTTTCAAGCGGGTCTTAGGATCTGCCTGGGGAAGGAAATGGCAGTGATGGAGATGAAGAGTGTAGTGGTTGCGTTGGTGAAACGGTTTCAAATTCGGGTGGTCGGATCCGACAAGGCTCCGAAATTCGCCCCGGGACTCACGGCCAACTTAAGTGGTGGGTTGCCGGTTCAAATCCAAGAAAGAATCTAA 1476 47.63 MASMPTTFCIFFFFFTALFSVFSFFLYILRMKLWCNCEVCRSYLSCNWVYEFRNLSDWYTHLLRKSPTGTIHVHVLGNIITANPDNVEHILKTKFENYPKGKRFSVILGDLLGRGIFNVDGDEWLFQRKMASLELGSFSVRTFANEIVTGEIKTRLIPLLSSVSDKKDQILDLQDVFRRFSFDNICKFSFGLDPGCLELSLPISDFAEAFDLATKLSAERGMTLSPIIWKLKRILKLGSEKKLEEAIKLVNILAAEMINQRRNLSVGEKQDLLSRFMASIDDDCYLRDIVISFLLAGRDTVAAALTSFFWLLSNNPEVESEIREEINRVMGQNMEPDSFEAAKEMHYVHAALYESMRLFPPVQFDSKFAEEDDIFPDGTFVRKGTRVTYHPYAMGRMEPIWGPDCLDFKPERWLKNGLFSPQNPFKYPVFQAGLRICLGKEMAVMEMKSVVVALVKRFQIRVVGSDKAPKFAPGLTANLSGGLPVQIQERI 491
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 3216908 3218510 - Bda030798.1 Bda09g00246 12496
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda09g00246 491 PANTHER SPHINGOLIPID TRANSPORTER SPINSTER-LIKE PROTEIN 3-RELATED 12 487 - -
Bda09g00246 491 Gene3D Cytochrome P450 44 490 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bda09g00246 491 PRINTS P450 superfamily signature 296 313 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bda09g00246 491 PRINTS P450 superfamily signature 350 361 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bda09g00246 491 PRINTS P450 superfamily signature 428 437 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bda09g00246 491 PRINTS P450 superfamily signature 437 448 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bda09g00246 491 PRINTS E-class P450 group I signature 437 460 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bda09g00246 491 PRINTS E-class P450 group I signature 285 302 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bda09g00246 491 PRINTS E-class P450 group I signature 305 331 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bda09g00246 491 PRINTS E-class P450 group I signature 427 437 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bda09g00246 491 Pfam Cytochrome P450 77 471 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bda09g00246 491 PANTHER CYTOCHROME P450 12 487 - -
Bda09g00246 491 SUPERFAMILY Cytochrome P450 53 490 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda09g00246 Bda-Chr9:3216908 Bda12g00743 Bda-Chr12:35171536 8.10E-131 dispersed
Bda01g02145 Bda-Chr1:57388044 Bda09g00246 Bda-Chr9:3216908 9.78E-90 transposed
Bda05g01006 Bda-Chr5:58522282 Bda09g00246 Bda-Chr9:3216908 1.76E-142 transposed
Bda07g00558 Bda-Chr7:6929075 Bda09g00246 Bda-Chr9:3216908 8.42E-104 transposed
Bda08g00144 Bda-Chr8:1356042 Bda09g00246 Bda-Chr9:3216908 2.74E-24 transposed
Bda11g01296 Bda-Chr11:13676325 Bda09g00246 Bda-Chr9:3216908 3.99E-108 transposed
Bda12g00137 Bda-Chr12:1234751 Bda09g00246 Bda-Chr9:3216908 5.96E-115 transposed
Bda07g00673 Bda-Chr7:8011468 Bda09g00246 Bda-Chr9:3216908 2.75E-54 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda09g00246 K20624 - zju:107410505 742.651