Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda09g00275 ATGGGGGTTTCTGGGAAATGGATAAGAGCACTTGTTGGTTTAAAGAAATCTGAAAAATCACAATCTTCTGAAAAAAATCAAAACAAGACACCTGGTGGCAAGTTCAGACATCAGAGAAAGCACTCTCTTGAGGTTGATGCAGATAAACTTCGGGCCGAATTGGATTCAAATAGCAGCACATTAGTTGGGGATGCTAATACTCATACTGATCGATATCCTGCTGGTTTGCCTTCAAATTCGCTTCATTTACTTGACATTTCACAGAATCCTCAGAATGAAAGAGAAAAGTTGGCTGCTATACGAATCCAAACAACCTTTCGAGGATTTCTGGCTAGGAGAGCTCTCAGAGCTTTGAAAGGATTAGTGAGGCTTCAAGCTCTTGTCAGGGGTCATGCTGTCAGAAAGCAAGCAGCAATTACACTACGATGTATGCAAGCTTTAGTGAGAGTTCAAGCTCGGGTCAGAGCAAGGCGTGTTCGTCTCGCATTAGAAAGTGAAACTTCTCAACAAAAGCTTCAACAACAACTTGAAAATGAGGCTCGTGTGAGAGAAATAGAGGAAGGGTGGTGCGACAGTGTAGGATCTGTTGAAGAGATTCAAGCCAAGCTGTTAAAGAGGCAGGAGGCTGCAGCCAAGCGCGAGAGAGCCATGGCATATGCTATGGCTCATCAGTGGCAAGCAAGTTCGAGGCAGCAAACTGCTCCATCCGGGTTTGAACCAGATAAAAACAGCTGGGGTTGGAATTGGTTGGAAAGATGGATGGCCGTTCGTCCTTGGGAAAATCGTTTTCTTGACATTAATCTCCGAGATGGAGTGATGATAATAGAGAAAGAATCGGCGGAGGCTAGAAATAACACTGGATCTCAGTTAAAAGGTAGTGGGAAGAAGCCAAACGTTTCAACTGCACAATCTAACCTCTCAAACCAGAAAACACGCCCGTCTAATTCTGAAGGTTCCAGTTCTTCTCCCAGTAAATCAGCAGGCATGGTAGAGCCAATGGCTGCCCCTGCCCAGTTCTCAAACCCAAAGTCCAAGCCTTCTCATGCAAAGACCGCCGAAGAAGTCAAAAAACCAGTTGTTGGATCAAGATCCGTTAGTAACCCAAAAGAGCGATCCACTCAATTTGAGAAACAGGCGAAAAAGCGGCTATCTCTGCCTAATAGTGGAACTTCCGTCTCTAATTTAGTGATGAATTCGAGCCGACATGGAGGCAAATCCAGCACCAGCTCTCTCAAACCCATCAAAGATAAGTCTAAGCTTGACGGAAAAGGCGAAGAAAAGGTCATAAAATCCATCCCACTCGCCGTTGATCAGCAGAGCTGA 1323 45.05 MGVSGKWIRALVGLKKSEKSQSSEKNQNKTPGGKFRHQRKHSLEVDADKLRAELDSNSSTLVGDANTHTDRYPAGLPSNSLHLLDISQNPQNEREKLAAIRIQTTFRGFLARRALRALKGLVRLQALVRGHAVRKQAAITLRCMQALVRVQARVRARRVRLALESETSQQKLQQQLENEARVREIEEGWCDSVGSVEEIQAKLLKRQEAAAKRERAMAYAMAHQWQASSRQQTAPSGFEPDKNSWGWNWLERWMAVRPWENRFLDINLRDGVMIIEKESAEARNNTGSQLKGSGKKPNVSTAQSNLSNQKTRPSNSEGSSSSPSKSAGMVEPMAAPAQFSNPKSKPSHAKTAEEVKKPVVGSRSVSNPKERSTQFEKQAKKRLSLPNSGTSVSNLVMNSSRHGGKSSTSSLKPIKDKSKLDGKGEEKVIKSIPLAVDQQS 440
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 3420580 3424522 - Bda030831.1 Bda09g00275 12525
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda09g00275 440 PANTHER IQ-DOMAIN 5-RELATED 2 392 - -
Bda09g00275 440 MobiDBLite consensus disorder prediction 283 327 - -
Bda09g00275 440 SMART iq_5 117 138 IPR000048 GO:0005515
Bda09g00275 440 SMART iq_5 94 116 IPR000048 GO:0005515
Bda09g00275 440 MobiDBLite consensus disorder prediction 14 42 - -
Bda09g00275 440 Gene3D - 92 144 - -
Bda09g00275 440 ProSiteProfiles IQ motif profile. 119 146 IPR000048 GO:0005515
Bda09g00275 440 MobiDBLite consensus disorder prediction 379 411 - -
Bda09g00275 440 MobiDBLite consensus disorder prediction 412 430 - -
Bda09g00275 440 ProSiteProfiles IQ motif profile. 95 123 IPR000048 GO:0005515
Bda09g00275 440 Pfam IQ calmodulin-binding motif 98 116 IPR000048 GO:0005515
Bda09g00275 440 MobiDBLite consensus disorder prediction 283 440 - -
Bda09g00275 440 PANTHER IQ-DOMAIN 5-RELATED 2 392 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda01g01331 Bda-Chr1:48956185 Bda09g00275 Bda-Chr9:3420580 5.95E-31 dispersed
Bda03g01731 Bda-Chr3:56756295 Bda09g00275 Bda-Chr9:3420580 5.81E-47 dispersed
Bda04g00916 Bda-Chr4:58942813 Bda09g00275 Bda-Chr9:3420580 3.50E-06 dispersed
Bda05g00781 Bda-Chr5:56268286 Bda09g00275 Bda-Chr9:3420580 4.27E-33 dispersed
Bda07g01935 Bda-Chr7:36845393 Bda09g00275 Bda-Chr9:3420580 1.87E-31 dispersed
Bda09g00275 Bda-Chr9:3420580 Bda15g00176 Bda-Chr15:4321536 2.22E-41 dispersed
Bda09g00275 Bda-Chr9:3420580 Bda05g01241 Bda-Chr5:60300088 1.96E-52 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda09g00275 - - pvy:116125522 510.375