Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda09g00283 ATGGCAGCTCAGGCGTTGGTATCGTCGTCTCTAACCGCTTCCGTCGGAGCAGGACGGCGTAAACTTGGAGGAAAACCATTGTTTCAGTCGAGAAAATCGGCTTCTTTTGTAGTCAGAGCCGAAGCTACTCCCCCTGTCAAGCAAGGAGCAGATCGACAGTTATGGTTTGCATCCAAACAGAGCCTCTCATACTTGGACGGCAGTCTACCCGGCGACTATGGATTTGATCCGTTGGGACTCTCCGATCCGGAAGGAACCGGAGGATTCATCGAGCCAAGATGGCTAGCTTACGGAGAAATATTCAACGGCCGATGTGCAATGGTAGGCGCTTTCGGAGCCATAGCTCCAGAAATTTTGGGAAAACTCGGCCTTGTCCCACAAGAAACCGCCCTTCCGTGGTTCAAAACTGGTGTAATCCCCCCAGCCGGAACCTACAACTACTGGGCCGATTCTTACACGCTCTTCGTCTTCGAAATGGCACTAGTGGGATTTGCCGAGCACAGAAGATTCCAAGACTGGGCGAACCCAGGATCAATGGGAAAACAATACTTCCTAGGATTGGAAAAATTCTTGGGAGGATCGGGAGACCCTGCCTATCCAGGAGGACCATTGTTCAACCCTCTAGGGCTTGGGAAAGACGAGAAATCGATGAGGGAGATGAAGGTGAAAGAGGTCAAAAATGGGAGACTGGCAATGCTTGCGATTCTGGGTTACTTTGTCCAGGCTCTGGTGACGGGAGTCGGACCATTCCAGAACCTTCTGGATCATTTGGCTGACCCTATCCACAACAATATCTTGACCAGCCTCAAGTTCCACTAA 819 51.04 MAAQALVSSSLTASVGAGRRKLGGKPLFQSRKSASFVVRAEATPPVKQGADRQLWFASKQSLSYLDGSLPGDYGFDPLGLSDPEGTGGFIEPRWLAYGEIFNGRCAMVGAFGAIAPEILGKLGLVPQETALPWFKTGVIPPAGTYNYWADSYTLFVFEMALVGFAEHRRFQDWANPGSMGKQYFLGLEKFLGGSGDPAYPGGPLFNPLGLGKDEKSMREMKVKEVKNGRLAMLAILGYFVQALVTGVGPFQNLLDHLADPIHNNILTSLKFH 272
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 3508116 3509136 - Bda030840.1 Bda09g00283 12533
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda09g00283 272 PANTHER CHLOROPHYLL A/B BINDING PROTEIN 1 271 IPR001344 GO:0009765|GO:0016020
Bda09g00283 272 SUPERFAMILY Chlorophyll a-b binding protein 51 268 - -
Bda09g00283 272 Gene3D Chlorophyll a/b binding protein domain 53 271 - -
Bda09g00283 272 Pfam Chlorophyll A-B binding protein 63 242 IPR022796 -
Bda09g00283 272 PANTHER CHLOROPHYLL A-B BINDING PROTEIN, CHLOROPLASTIC 1 271 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda06g00542 Bda-Chr6:7698513 Bda09g00283 Bda-Chr9:3508116 8.45E-49 dispersed
Bda09g00283 Bda-Chr9:3508116 Bda15g00608 Bda-Chr15:9272694 5.59E-40 dispersed
Bda07g00716 Bda-Chr7:8453364 Bda09g00283 Bda-Chr9:3508116 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda09g00283 K08909 - csv:101202993 491.115