Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda09g00387 ATGTCTGAACTCGAAGATAGTTTTACCTCCACCTTTGATCCTTTTGCTGATGCAAATGCTGAGGACTCTGGTGCTGGGTCAAAGGAGTACGTGCACATTCGTATTCAGCAGCGAAATGGTCGGAAAAGCCTGACGACTGTGCAAGGATTGAAGAAAGAATTCAGCTACAACAAGATATTGAAGGACCTCAAGAAGGAATTCTGCTGCAATGGCACTGTTGTCCAGGACCCAGAACTAGGGCAGGTTATTCAACTTCAGGGTGATCAAAGGAAAAATGTGTCTTCTTTCCTTGTTCAAGCTGGGATTGTGAAGAAAGACAACATCAAGATTCATGGTTTTTGA 342 43.57 MSELEDSFTSTFDPFADANAEDSGAGSKEYVHIRIQQRNGRKSLTTVQGLKKEFSYNKILKDLKKEFCCNGTVVQDPELGQVIQLQGDQRKNVSSFLVQAGIVKKDNIKIHGF 113
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 4936926 4938510 + Bda030969.1 Bda09g00387 12637
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda09g00387 113 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR SUI1 1 113 - -
Bda09g00387 113 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR SUI1 1 113 - -
Bda09g00387 113 SUPERFAMILY eIF1-like 10 113 IPR036877 GO:0003743|GO:0006413
Bda09g00387 113 MobiDBLite consensus disorder prediction 1 26 - -
Bda09g00387 113 Pfam Translation initiation factor SUI1 28 102 IPR001950 GO:0003743|GO:0006413
Bda09g00387 113 Gene3D - 1 113 - -
Bda09g00387 113 MobiDBLite consensus disorder prediction 1 16 - -
Bda09g00387 113 CDD eIF1_SUI1 29 112 IPR005874 GO:0003743
Bda09g00387 113 TIGRFAM SUI1_MOF2: translation initiation factor SUI1 10 113 IPR005874 GO:0003743
Bda09g00387 113 PIRSF Transl_init_SUI1_Euk 1 113 IPR005874 GO:0003743
Bda09g00387 113 ProSiteProfiles Translation initiation factor SUI1 family profile. 31 101 IPR001950 GO:0003743|GO:0006413
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bda05g00734 Bda09g00387 CCT
Bda09g00387 Bda12g00894 CCT
Bda05g00734 Bda09g00387 ECH
Bda09g00387 Bda12g00894 ECH
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda07g00365 Bda-Chr7:4661914 Bda09g00387 Bda-Chr9:4936926 9.16E-60 dispersed
Bda09g00387 Bda-Chr9:4936926 Bda09g00402 Bda-Chr9:5042126 1.07E-58 dispersed
Bda12g00894 Bda-Chr12:39679941 Bda09g00387 Bda-Chr9:4936926 1.48E-69 wgd
Bda05g00734 Bda-Chr5:55711810 Bda09g00387 Bda-Chr9:4936926 3.06E-75 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda09g00387 K03113 - fve:101311412 213.386