Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda09g00389 ATGATCTGTGCTGTCAAGCAGACTGTGACCGCCGTCACTGCCACCCACGCTCTTCACCGGAGGAGAATTCCGGCTTCCGCCCCGCGATCTCCAATTCTAACTCCCCTACTGTGGCGAAAACCTAAACTCACTGCTTTCTCGTTGCAAAAGCCCATACATGTTTCGTCGATCGAGAGATCCGTATCACTGAGAGGTCGGAAAGACAGCTTGATCAAATGCGAAGCTTACGAAGCAGACCAATCGCAGCCTGTCGAGTCAAAAATCGAGTTGAAGAACACCGAAGCGCCATCAGAGGCGGCGAAAAGGGTGAAGATCGGGTCATACTTCGCTCTTTGGTGGGCTTTAAATGTTGTTTTCAATATCTACAACAAAAAGGTGTTGAATGCTTACCCATATCCATGGCTGACCTCCACTCTCTCTCTGGCTGCTGGTTCTTTGATCATGCTGATCTCCTGGGCAACGAGAATAGCCGAGGCGCCCAAGACTGACTTTGATTTCTGGAAATCTTTGCTCCCTGTTGCTGTAGCCCACACCATTGGACATGTTGCAGCAACTGTGAGCATGTCTAAGGTTGCAGTCTCGTTTACTCACATTATCAAAAGTGGAGAGCCTGCTTTTAGTGTATTAGTTTCGAGGCTTTTGTTGGGCGAGACTTTCCCCCTTCCGGTGTACCTCTCCCTCATCCCGATCATCGGCGGTTGCGCTCTAGCTGCTGTTACTGAGCTCAATTTCAATATGACTGGGTTTATGGGGGCGATGATATCGAACTTGGCATTCGTGTTTCGTAACATCTTTTCAAAAAGGGGCATGAAGGGGAAATCCGTGAGCGGAATGAACTACTATGCTTGCCTCTCTATACTTTCCCTCTTGATTCTCACACCATTCGCATTCGTCGTGGAGGGACCCAAGCTGTGGGCTGCAGGATGGCAAACGGCCATCTCTCAAATCGGACCTCATTTTGTTTGGTGGGTGGTAGCACAAAGTGTGTTCTATCATCTCTACAATCAAGTATCATACATGTCATTGGATGAGATTTCTCCCTTAACGTTTAGCGTTGGGAATACCATGAAACGCATATCAGTTATCGTCTCTTCCATCATCATTTTCCGAACGCCTATTCAGCCCATCAATGCTCTTGGAACCGCCATCGCCATTCTCGGAACATTCTTATATTCCCAGGCAAAGCAGTGA 1191 48.19 MICAVKQTVTAVTATHALHRRRIPASAPRSPILTPLLWRKPKLTAFSLQKPIHVSSIERSVSLRGRKDSLIKCEAYEADQSQPVESKIELKNTEAPSEAAKRVKIGSYFALWWALNVVFNIYNKKVLNAYPYPWLTSTLSLAAGSLIMLISWATRIAEAPKTDFDFWKSLLPVAVAHTIGHVAATVSMSKVAVSFTHIIKSGEPAFSVLVSRLLLGETFPLPVYLSLIPIIGGCALAAVTELNFNMTGFMGAMISNLAFVFRNIFSKRGMKGKSVSGMNYYACLSILSLLILTPFAFVVEGPKLWAAGWQTAISQIGPHFVWWVVAQSVFYHLYNQVSYMSLDEISPLTFSVGNTMKRISVIVSSIIIFRTPIQPINALGTAIAILGTFLYSQAKQ 396
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 4950552 4953543 + Bda030971.1 Bda09g00389 12639
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda09g00389 396 PANTHER SOLUTE CARRIER FAMILY 35 40 396 - -
Bda09g00389 396 SUPERFAMILY Multidrug resistance efflux transporter EmrE 145 239 - -
Bda09g00389 396 Pfam Triose-phosphate Transporter family 104 392 IPR004853 -
Bda09g00389 396 PANTHER GLUCOSE-6-PHOSPHATE/PHOSPHATE TRANSLOCATOR 2, CHLOROPLASTIC-LIKE 40 396 - -
Bda09g00389 396 TIGRFAM tpt: Tpt phosphate/phosphoenolpyruvate translocator 104 395 IPR004696 GO:0016021|GO:0022857|GO:0055085
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bda07g00346 Bda09g00389 BCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda09g00389 Bda-Chr9:4950552 Bda11g01656 Bda-Chr11:50639562 3.30E-74 dispersed
Bda08g00197 Bda-Chr8:1801806 Bda09g00389 Bda-Chr9:4950552 1.56E-102 transposed
Bda08g00208 Bda-Chr8:1877223 Bda09g00389 Bda-Chr9:4950552 1.16E-102 transposed
Bda07g00346 Bda-Chr7:4504625 Bda09g00389 Bda-Chr9:4950552 3.46E-154 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda09g00389 K15283 - csv:101220046 623.624